Gene Pfl01_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0913 
Symbol 
ID3715816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1063616 
End bp1065013 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content62% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_346645 
Protein GI77457140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAACC AGATTGCCAG CTTTCGGGCG GCACTCGACG CCCGTCCTGT GTCCCGCTTT 
CAGTGGTTGC TCCTGATTCT TCTCGCCTTG CTGCTGGTCA CCGACGGCTA TGACGCCCAG
GTGCTCGGTT ACGTGGTGCC GGCACTGGCG CAGGACTGGG GCCTGGAAAA ATCCGCATTC
GGTCCGGTAT TCAGCGCCAA CCTTCTGGGC CTGACCCTCG GTTCGCTCGC CGTGACGCCG
CTGGCCGATC GCTTCGGCGT TCGACGGATT CTGCTCGCCT GCGTGCTGAT CTACGCCAGC
CTCACCGTGC TGATGGTGTT CGCCGATTCC CTGAATACCC TGATGATCGC GCGTTTCATC
TGCGGCATCG GCATGGGCGG CGCGATGCCC AGCGCCATGG CGTTGATGTC GGAATATTCA
CCGCCACGCC TGCGTACGCT GATGGTGACG CTGGCGGCCT GCGGTTTTTC TTTCGGCGGT
GCGGCGGGTG GTTTTGTCGC GGCCGGTTTC ATTGACCGTT TCGGTTGGCA AGCGGTGTTC
CTCGCCGGCG GTGTCACGCC GTTGCTGTTG TTCCCGTTTC TCTGGTGGAT GCTGCCGGAA
TCCTTGCCAC GACTGCTGCG TGACGCACCA CCCTATGCGC GCCTGCGCAA AGTCACCGCG
CGAATGCTGC CAGACTGGCA ACCGCCCGCC GCATCGGTTG AGCAGAATGA GCGCGAGCAG
GGCAGCAAAC TGACCGTGGT GGAGTTGTTC CGCAATGGTT ACGCCCGTCC GACCTTGCTG
ATCTGGGCGA CGTTTTTCGT CAGCCTGATC CTGCTGTATT TCATGATCAG CTGGCTGCCG
TCGCTGCTGC TCGAAAGCGG GCTGAAACTC AATGAAGCGA ACCTGGTGAC GTCGATGTTC
CTGTTCGCCG GCACGCTCGG CGCGATCTGC ATGGCGTGGT TCGCCGACCG CTTGAAAAGC
AAGGTGCGAC TGCTGTCCGG CGTGTTGGCC GGCGCGGCGG TGTGCACGAT CCTGCTGGGC
CTGAACCACG ACAATCCGCG TTATCTGGTG GCCTGTGTGT TTACGGCGGG GTTTTGCATC
ATTGGCGGGC AACTGACGCT CAATGCGTTC GCCAGCAATT TCTATCCGGC CCACGTGCGC
GCTACCGGCA CCGGCTGGGC ATTGGGAGTA GGGCGGTTCG GCTCGATTCT CGGGCCGCTG
TTCGGCAGCC TGTTGCTGGC AACGCACATT CCGGTGGAGC AGATTTTCTT CTTCTGCGCG
ATTCCGGCGG TGATTGCGGC GTTGCTGATC ATTCAGGTGC GTTCGCCAGC CACTGCGCTG
TTCAGTGGAC AACCGCGTTC GGTGGCAGAT GGCCCAGCCG TTCCGTCAGG CGAAGTCGCT
GAATCGGGTC GTCGCTGA
 
Protein sequence
MHNQIASFRA ALDARPVSRF QWLLLILLAL LLVTDGYDAQ VLGYVVPALA QDWGLEKSAF 
GPVFSANLLG LTLGSLAVTP LADRFGVRRI LLACVLIYAS LTVLMVFADS LNTLMIARFI
CGIGMGGAMP SAMALMSEYS PPRLRTLMVT LAACGFSFGG AAGGFVAAGF IDRFGWQAVF
LAGGVTPLLL FPFLWWMLPE SLPRLLRDAP PYARLRKVTA RMLPDWQPPA ASVEQNEREQ
GSKLTVVELF RNGYARPTLL IWATFFVSLI LLYFMISWLP SLLLESGLKL NEANLVTSMF
LFAGTLGAIC MAWFADRLKS KVRLLSGVLA GAAVCTILLG LNHDNPRYLV ACVFTAGFCI
IGGQLTLNAF ASNFYPAHVR ATGTGWALGV GRFGSILGPL FGSLLLATHI PVEQIFFFCA
IPAVIAALLI IQVRSPATAL FSGQPRSVAD GPAVPSGEVA ESGRR