Gene Pfl01_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0863 
Symbol 
ID3715596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1010765 
End bp1011577 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content62% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_346595 
Protein GI77457090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.535463 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG ATAACGCCTA CGCGGTCGAG CTGAAGGGAG TCTCCTTCAA GCGCGGTGCG 
CGGAGCATTT TCAATAACGT CGATATCCGC ATCCCGCGCG GCAAGGTCAC CGGCATCATG
GGGCCTTCCG GGTGTGGCAA GACCACGCTG TTGCGCCTGA TGGGCGCCCA GTTGCGGCCA
TCCAAGGGCG AGGTCTGGGT CAACGGCCAG AACCTGCCGA AGCTGTCGCG CAGCGATCTG
TTCGATGCGC GCAAGCACAT GGGCGTGCTG TTTCAGAGCG GTGCGCTGTT CACCGATCTC
GATGTATTCG AGAACGTCGC CTTTCCGCTG CGCGTTCATA CCGAACTGCC GGACGAGATG
ATCCGCGACA TCGTGCTGCT CAAGTTGCAG GCGGTAGGAC TGCGCGGTGC GATCGAACTG
ATGCCTGACG AGCTGTCCGG CGGGATGAAG CGTCGTGTTG CCCTGGCCCG GGCCATTGCC
CTCGACCCGC AGATCCTCAT GTACGACGAA CCGTTCGTCG GCCAGGATCC GATCGCCATG
GGCGTTCTGG TTCGCCTGAT CCGTCTGCTC AACGATGCCC TGGGGATCAC CAGCATCGTG
GTGTCCCACG ACCTCGCCGA AACCGCGAGC ATCGCCGACT ACATCTATGT GGTCGGCGAT
GGCCAGGTTT TGGGACAGGG CACGCCGGAC GAACTGATGA GCTCGGACGA TCCGCGTATC
CGTCAATTCA TGACCGGTGA ACCCGACGGC CCGGTGCCGT ATCACTTTCC AGCGCCGGAT
TACCGCGCCG ATCTTCTGGG GAAGCGCCGC TGA
 
Protein sequence
MSADNAYAVE LKGVSFKRGA RSIFNNVDIR IPRGKVTGIM GPSGCGKTTL LRLMGAQLRP 
SKGEVWVNGQ NLPKLSRSDL FDARKHMGVL FQSGALFTDL DVFENVAFPL RVHTELPDEM
IRDIVLLKLQ AVGLRGAIEL MPDELSGGMK RRVALARAIA LDPQILMYDE PFVGQDPIAM
GVLVRLIRLL NDALGITSIV VSHDLAETAS IADYIYVVGD GQVLGQGTPD ELMSSDDPRI
RQFMTGEPDG PVPYHFPAPD YRADLLGKRR