| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0857 |
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| Symbol | |
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| ID | 3715590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1005472 |
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| End bp | 1006965 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_346589 |
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| Protein GI | 77457084 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.718619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAT CGCTAGTCTT GAGAATGGGC CAGCAGCTGA CGATGACACC GCAGCTGCAA
CAGGCCATCC GCCTGCTCCA ATTGTCGACC CTGGATCTGC AACAGGAAAT CCAGGAGGCT
CTGGAATCCA ATCCGATGCT CGAACGCCAG GAAGACGGCG ACGACTTCGA CAACTCCGAT
CCCATGGCCG ACAACGCCGA ACAGAAGCCC AACACCGAGA TCCAGGAACC TTCCTATCAG
GAGACCGCGC CGACAGTCGA CAACCTCGAA GACGGCGAAT GGAACGAGCG CATCCCCAAC
GAACTGCCCG TCGACACCGC TTGGGAAGAC GTCTATCAGA CCAGCGCCAG CAGCCTGCCG
AGCAGCGATG ATGACGAGTG GGACTTCACC ACCCGCACCT CCGCCGGCGA GAGCCTGCAA
AGTCACCTGC TGTGGCAGTT GAACCTTGCC CCGATGTCCG ACACCGATCG CCTGATCGCT
GTCACCCTGA TCGATTGCAT CAACAATCAG GGTTACCTCG ACGAAACCCT CGAAGAAATT
CTCGACGCCT TCGATCCGGA ACTCGACATC GAGCTGGACG AAATCGAAGC CGTCCTGCAC
CGCATCCAGC AGTTCGAACC GGCCGGCATC GGCGCACGCA ACCTGGGCGA ATGCCTGTTG
CTGCAATTGC GCCAGCTGTC GGCCAAGACC CCTTGGCTGG CAGAGGCCAA GCGTCTGGTC
ACCGATTACA TCGACCTGCT CGGCAGCCGC GACTACAGCC AGCTGATGCG CCGCATGAAG
CTCAAGGAAG ACGAACTGCG CCAAGTCATC GAACTGGTGC AGAGCCTCAA CCCGCGCCCC
GGCTCTCAGA TCGAATCCAC CGAAGCCGAA TACGTGGTAC CTGACGTCAT CGTACGCAAG
GACAACGAGC GCTGGCTGGT CGAGCTGAAC CAGGAATCGG TGCCGCGCCT GCGGGTCAAC
GCCCAGTACG CCGGTTTCGT GCGCCGCGCC GACACCAGCG CCGACAACAC CTTCATGCGC
AATCAGTTGC AGGAAGCCCG CTGGTTCATC AAGAGCCTGC AGAGCCGCAA CGAAACCCTG
ATGAAAGTAG CGACCCAGAT CGTCGAGCAC CAGCGCGGCT TTCTGGAATA CGGCGACGAA
GCGATGAAGC CGCTGGTCCT GCATGACATC GCTGAAGCGG TGGGCATGCA CGAGTCGACG
ATTTCCCGCG TGACCACGCA AAAGTTCATG CATACCCCGC GAGGCATATA TGAACTGAAA
TACTTTTTCT CCAGCCATGT GAGCACTTCA GAAGGCGGTG AATGCTCGTC CACGGCGATC
CGCGCGATCA TCAAGAAACT GGTTGCCGCG GAAAATCAGA AAAAGCCGTT GAGTGACAGC
AAGATCGCTG GTTTACTGGA GGCACAAGGC ATTCAGGTGG CTCGCCGCAC CGTCGCCAAG
TACCGCGAAT CCCTCGGGAT CGCGCCTTCG AGCGAACGCA AGCGGTTGAT GTAA
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| Protein sequence | MKPSLVLRMG QQLTMTPQLQ QAIRLLQLST LDLQQEIQEA LESNPMLERQ EDGDDFDNSD
PMADNAEQKP NTEIQEPSYQ ETAPTVDNLE DGEWNERIPN ELPVDTAWED VYQTSASSLP
SSDDDEWDFT TRTSAGESLQ SHLLWQLNLA PMSDTDRLIA VTLIDCINNQ GYLDETLEEI
LDAFDPELDI ELDEIEAVLH RIQQFEPAGI GARNLGECLL LQLRQLSAKT PWLAEAKRLV
TDYIDLLGSR DYSQLMRRMK LKEDELRQVI ELVQSLNPRP GSQIESTEAE YVVPDVIVRK
DNERWLVELN QESVPRLRVN AQYAGFVRRA DTSADNTFMR NQLQEARWFI KSLQSRNETL
MKVATQIVEH QRGFLEYGDE AMKPLVLHDI AEAVGMHEST ISRVTTQKFM HTPRGIYELK
YFFSSHVSTS EGGECSSTAI RAIIKKLVAA ENQKKPLSDS KIAGLLEAQG IQVARRTVAK
YRESLGIAPS SERKRLM
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