Gene Pfl01_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0842 
Symbol 
ID3715555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp989737 
End bp991215 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content59% 
IMG OID 
ProductRNAse G 
Protein accessionYP_346574 
Protein GI77457069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0915958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC GAGACCCTGC CATGAGTGAA GAGATTCTGA TCAACATCAC GCCGATGGAA 
TCGCGCGTGG CGGTGGTCGA AAACGGTGTG CTGCAAGAAG TGCACGTCGA GCGTACGCAA
AAACGCGGGA TCGTCGGCAA CATCTATAAA GGCAAGGTGG TGCGAGTCCT GCCGGGCATG
CAGGCGGCCT TCGTCGACAT CGGCCTGGAT CGTGCTGCCT TCATTCATGC CTCGGAAATT
TCCCTGCGCG AAGGTCCTGC GGTGGAAAGC ATCAGTGCGC TTGTACACGA AGGCCAGAGC
CTGGTGGTGC AGGTCACCAA GGATCCGATA GGTTCCAAAG GCGCGCGGCT GACCACGCAG
CTGTCGATCC CATCGCGCTA TCTGGTGTAC ATGCCGCGCA CCGCTCACGT CGGTATTTCT
CTGAAGATCG AAGACGAAGC CGAGCGCGAA CGCCTCAAGC AGGTAGTCAG CGATTGCGTG
GCCAAAGAAG GCATCAAGGA GGCTGGCGGC TTTATTTTGC GCACCGCCGC CGAAGGTGCC
GGGGCCGATG AGATCCTGAT GGACATCCGC TATCTGCGCC GCCTGTGGGA TCAGATCAAC
GAACAGATCA AGACCATCGG CGCACCGAGC GTGATTTACG AAGACCTCGG CCTGGCGCTG
CGCACCCTGC GCGATCTGGT CAGCCCGAAG ATCGAGAAGA TCCGCATCGA CTCCCGAGAA
ACTTTCCAGA AGACCACGCA GTTCGTCGCC GAACTGATGC CGGAAATCGC CGATCGTCTG
GAACACTACC CGGGTGAACG ACCGATTTTC GACCTGTATG GCGTCGAAGA CGAAATCCAG
AAGGCCCTGG AGCGCAAGGT GCCGCTGAAG TCTGGCGGTT ATCTGGTGAT CGATCCGGCC
GAAGCCATGA CCACCATCGA TGTGAACACC GGAGCGTTTG TCGGTCATCG CAACCTCGAA
GAAACCATCT TCAAGACCAA CCTCGAAGCC GCGACCGCGA TTGCCCGGCA GATGCGCCTG
CGTAATCTGG GCGGGATCAT CATCATCGAC TTCATCGACA TGGAAGACGA AGAGCACCAG
CGTCAGGTGC TGCGTACCCT GGAAAAACAA CTGGAGCGCG ATCACGCCAA GACCAACATC
ATCGGCATCA CCGAGTTGGG CCTGGTGCAG ATGACGCGCA AGCGCACCCG CGAAAGTCTC
GAGCAGGTGC TGTGCGAACC GTGCAGCAGC TGTCAGGGCC GGGGCAAGCT GAAAACCCCG
GAAACCATTT GCTACGAGAT TTTCCGCGAG ATCCTGCGTG AAGCCCGGGC CTATCAGGCC
GAGGGGTATC GGGTGCTGGC GAACCAGAAA GTGGTGGATC GCCTGCTCGA TGAAGAGTCC
GGTAACGTGG CCGAACTTGA AGGTTTCATC GGGCGCACCA TACGCTTCCA GGTGGAAACC
ATGTATTCCC AGGAACAATA TGACGTGGTG CTGCTCTGA
 
Protein sequence
MPERDPAMSE EILINITPME SRVAVVENGV LQEVHVERTQ KRGIVGNIYK GKVVRVLPGM 
QAAFVDIGLD RAAFIHASEI SLREGPAVES ISALVHEGQS LVVQVTKDPI GSKGARLTTQ
LSIPSRYLVY MPRTAHVGIS LKIEDEAERE RLKQVVSDCV AKEGIKEAGG FILRTAAEGA
GADEILMDIR YLRRLWDQIN EQIKTIGAPS VIYEDLGLAL RTLRDLVSPK IEKIRIDSRE
TFQKTTQFVA ELMPEIADRL EHYPGERPIF DLYGVEDEIQ KALERKVPLK SGGYLVIDPA
EAMTTIDVNT GAFVGHRNLE ETIFKTNLEA ATAIARQMRL RNLGGIIIID FIDMEDEEHQ
RQVLRTLEKQ LERDHAKTNI IGITELGLVQ MTRKRTRESL EQVLCEPCSS CQGRGKLKTP
ETICYEIFRE ILREARAYQA EGYRVLANQK VVDRLLDEES GNVAELEGFI GRTIRFQVET
MYSQEQYDVV LL