Gene Pfl01_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0838 
Symbol 
ID3715551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp986267 
End bp987304 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content60% 
IMG OID 
Productrod shape-determining protein MreB 
Protein accessionYP_346570 
Protein GI77457065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00330287 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA AACTGCGTGG CATGTTTTCC AGCGATCTTT CCATTGACCT GGGCACTGCC 
AACACCCTTA TTTACGTGCG CGAGCGCGGT ATCGTCCTGA ATGAGCCATC GGTTGTGGCC
ATTCGGACAC ACGGTAACCA GAAAAGTGTC GTCGCTGTCG GCACCGAGGC CAAGCGCATG
CTCGGCCGTA CGCCGGGCAA CATTGCTGCC ATTCGTCCGA TGAAGGACGG CGTGATCGCC
GACTTCAGCG TCTGCGAAAA GATGCTGCAA TACTTTATCA ACAAGGTTCA CGAAAACAGC
TTTCTGCAGC CCAGCCCTCG TGTGCTGATC TGCGTTCCAT GCAAGTCCAC CCAGGTTGAG
CGTCGTGCCA TCCGTGAATC GGCCCTTGGC GCCGGTGCCC GTGAAGTGTT CCTGATCGAA
GAGCCGATGG CGGCAGCGAT CGGTGCCGGC CTGCCGGTTG AAGAAGCTCG CGGTTCGATG
GTCGTGGATA TCGGTGGTGG TACCACCGAA ATCGCGCTGA TCTCCCTGAA CGGTGTGGTC
TATGCCGAGT CCGTACGTGT TGGCGGCGAC CGCTTCGACG AAGCGATCAT CACCTACGTG
CGCCGCAACT ACGGCAGCCT GATCGGCGAA TCCACCGCCG AACGCATCAA GCAGGAAATC
GGCACGGCCT ACCCGGGCGG CGAAGTTCGC GAAGTCGACG TTCGCGGCCG TAACCTGGCC
GAAGGCGTTC CACGCGCATT CACCCTGAAC TCCAACGAAG TGCTGGAAGC TCTGCAAGAG
TCGCTGGCGA CCATCGTTCA GGCGGTGAAA AGTGCTCTGG AGCAATCGCC GCCGGAACTG
GCTTCCGACA TCGCCGAGCG TGGCCTGGTG CTGACCGGTG GTGGCGCGCT GCTGCGTGAC
CTCGACAAGC TGCTGGCTCA GGAAACCGGT CTGCCGGTGA TCGTTGCCGA AGATCCGCTG
ACCTGCGTCG CTCGCGGCGG TGGCCGTGCA TTGGAAATGA TGGACAAGCA CACCATGGAC
CTGCTCTCCA GCGAATAA
 
Protein sequence
MFKKLRGMFS SDLSIDLGTA NTLIYVRERG IVLNEPSVVA IRTHGNQKSV VAVGTEAKRM 
LGRTPGNIAA IRPMKDGVIA DFSVCEKMLQ YFINKVHENS FLQPSPRVLI CVPCKSTQVE
RRAIRESALG AGAREVFLIE EPMAAAIGAG LPVEEARGSM VVDIGGGTTE IALISLNGVV
YAESVRVGGD RFDEAIITYV RRNYGSLIGE STAERIKQEI GTAYPGGEVR EVDVRGRNLA
EGVPRAFTLN SNEVLEALQE SLATIVQAVK SALEQSPPEL ASDIAERGLV LTGGGALLRD
LDKLLAQETG LPVIVAEDPL TCVARGGGRA LEMMDKHTMD LLSSE