| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0835 |
|---|
| Symbol | gatB |
|---|
| ID | 3715491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 982844 |
|---|
| End bp | 984289 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
|---|
| Protein accession | YP_346567 |
|---|
| Protein GI | 77457062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.141166 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATGGG AAGTCGTGAT CGGGCTGGAG ATTCACACCC AGCTCACCAC CCGGTCGAAA
ATCTTTTCCG GTAGTTCCAC CCAGTTCGGT TCCGAGCCGA ACACCCAGGC CAGCCTGATC
GACCTGGGCA TGCCCGGCGT GCTGCCGGTG CTCAACCAGG AAGCGGTGCG CATGGCGGTG
ATGTTCGGTC TGGCGATTGA CGCCGAGATC GGTCAGCACA ACGTGTTCGC CCGTAAAAAC
TACTTCTACC CGGACCTGCC GAAGGGCTAC CAGATCAGCC AGATGGAGTT GCCGATCGTC
GGCAAGGGCC ACTTGGACAT CGCTCTGGAA GACGGCACGG TCAAACGCGT CGGCATCACC
CGCGCGCACC TGGAAGAAGA CGCCGGCAAG AGCCTGCACG AAGAATTCAG CGGTGCCACC
GGCATCGACC TGAACCGTGC CGGCACGCCG CTGCTGGAAA TCGTGTCCGA GCCTGACATG
CGCAGCGCCA AGGAAGCCGT GGCCTACGTC AAGGCGATCC ACGCGCTGGT ACGTTACCTG
GGCATCTGCG ATGGCAACAT GGCCGAAGGC TCGCTGCGTT GCGACTGCAA CGTGTCGATC
CGTCCGAAAG GCCAGGCCGA GTTCGGCACC CGCTGTGAAA TCAAGAACGT CAACTCGTTC
CGCTTCATCG AGAAGGCGAT CAACTCCGAG ATCCAGCGTC AGATCGACCT GATCGAAGAC
GGCGGCAAAG TGATCCAGCA GACCCGTCTG TACGATCCGA ACAAGGACGA AACCCGTCCG
ATGCGCAGCA AAGAAGAAGC CAACGACTAC CGTTACTTCC CCGATCCGGA CCTGCTGCCG
GTGGTCATCG AGGACTCGTT CCTCAATGAC GTGCGCGCCA CCCTGCCGGA ACTGCCACCG
CAGAAGCGCG AGCGCTTCCA GAGTGCGTTC GGTCTGTCGG CCTATGACGC CAACGTGCTG
GCCACCAGCC GTGAGCAGGC GGACTACTTC GAGAAAGTCG CCAGCATCGG CGGCGACGCC
AAACTGGCGG CGAACTGGGT GATGGTCGAG TTGGGCAGCC TGCTCAACAA GCAGAACCTG
GACATCGAGG ATTCGCCAGT TTCGGCCGAA CAACTGGGCG GCATGCTGCA GCGCATCAAG
GACAACACCA TCTCCGGCAA GATCGCCAAG GTGGTGTTTG AAGCGATGGC CAACGGCGAA
GGCAGCGCAG ACGAGATCAT CGAAAAGTGC GGCCTGAAGC AGGTTACCGA CACCGGCGCA
ATCTCGGCGG TGCTGGACGA AATGCTCGCG GCCAATGCCG AGCAGGTCGA GCAATACCGT
GCGGCAGACG AAGCCAAGCG CGGCAAGATG TTCGGCTTCT TCGTCGGCCA GGCCATGAAA
GCCTCCAAAG GCAAGGCCAA CCCGCAGCAA GTGAACGAAC TGCTGAAAAG CAAGCTCGAA
GGCTGA
|
|---|
| Protein sequence | MQWEVVIGLE IHTQLTTRSK IFSGSSTQFG SEPNTQASLI DLGMPGVLPV LNQEAVRMAV
MFGLAIDAEI GQHNVFARKN YFYPDLPKGY QISQMELPIV GKGHLDIALE DGTVKRVGIT
RAHLEEDAGK SLHEEFSGAT GIDLNRAGTP LLEIVSEPDM RSAKEAVAYV KAIHALVRYL
GICDGNMAEG SLRCDCNVSI RPKGQAEFGT RCEIKNVNSF RFIEKAINSE IQRQIDLIED
GGKVIQQTRL YDPNKDETRP MRSKEEANDY RYFPDPDLLP VVIEDSFLND VRATLPELPP
QKRERFQSAF GLSAYDANVL ATSREQADYF EKVASIGGDA KLAANWVMVE LGSLLNKQNL
DIEDSPVSAE QLGGMLQRIK DNTISGKIAK VVFEAMANGE GSADEIIEKC GLKQVTDTGA
ISAVLDEMLA ANAEQVEQYR AADEAKRGKM FGFFVGQAMK ASKGKANPQQ VNELLKSKLE
G
|
|---|
| |