Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0821 |
Symbol | |
ID | 3715477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 968853 |
End bp | 969413 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | two component Fis family transcriptional regulator |
Protein accession | YP_346553 |
Protein GI | 77457048 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0974274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.860547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGACG AAATCCAAGT CGAAGGCGAA GAACTGCCGC ATTTGCTGCT GGTCGACGAT GACGCGACCT TCACCCGGGT GATGGCCCGT GCCATGGCCC GCCGTGGTTT CCGCGTCAGC ACCGCCGGTT CCGCCGAGGA AGGCCTGACC ATCGCCCAGG CCGATCTGCC GGATTACGCC GCGCTGGACC TGAAAATGGA CGGCGATTCC GGTCTGGTGC TGCTGCCAAA ACTGCTGGAG CTGGACCCGG AAATGCGCGT GGTGATCCTC ACCGGTTACT CGAGCATTGC CACGGCGGTT GAAGCGATCA AGCGCGGCGC CTGCAACTAT CTGTGCAAAC CGGCGGATGC CGACGATGTG CTGGCAGCGC TGCTGTCCGA ACACGCCGAC CTCGACAGCC TGGTGCCGGA AAACCCGATG TCGGTGGATC GCCTGCAGTG GGAGCACATC CAGCGCGTGC TGACCGAGCA CGAAGGCAAC ATCTCCGCCA CGGCCCGCGC CCTGGGCATG CACCGCCGCA CCCTGCAGCG CAAATTGCAG AAGCGCCCGG TTCGTCGCTG A
|
Protein sequence | MSDEIQVEGE ELPHLLLVDD DATFTRVMAR AMARRGFRVS TAGSAEEGLT IAQADLPDYA ALDLKMDGDS GLVLLPKLLE LDPEMRVVIL TGYSSIATAV EAIKRGACNY LCKPADADDV LAALLSEHAD LDSLVPENPM SVDRLQWEHI QRVLTEHEGN ISATARALGM HRRTLQRKLQ KRPVRR
|
| |