| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0814 |
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| Symbol | |
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| ID | 3715431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 959660 |
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| End bp | 961075 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | outer membrane porin |
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| Protein accession | YP_346546 |
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| Protein GI | 77457041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00657196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.61306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA GCAATACCGC GATACTGGCC TTGGCCATCA GCAGCATCAC CGCCACGGCT
TACGCGGAAA CCCAAAGCCA GGCGTTCACT CCGGTGACCG TCAACGAGAA GAGCGCCCAG
GCTGAAGCCA CCGGCTTCCT CGAAGGTCAG TCGATCAGCG GCTCGACCCG TAACTGGTAC
GCCAACGAAC AACTGAAACG CGGCGGCAAG TTCACCTATC GCAAGGATGG CGTGGCCACT
CCGACCGACC GCCGTATCAA CTGGGTGCAG GGCACCATCG TCAAGTACAA CTCGGGCTTC
ACCGAAGGCA CCGTCGGTTT CAGCACCGAA GTGGCGGCGT ACAACGCCAT CGCGCTGGAG
CGTGACCGCG AGAACCTGGC TTCCAACAAC GGTGGCGCAC CAGGCACCCG TCCAGGCGCG
GGCAACAACC GTACCCTGAC CCGTGAAGGC GGCGAAGCCC AGGGCCAGTG GAGCAAAGTC
GGCCTGGCCA ACGTCAAGGC GCGTATCTCC AACACCACCC TGACCGCCGG CCGCATGAAC
TTCAGCAGCC CGCAGGTCGA CGTGATCGGC AACCGTCCGC TGCCATCGAG CTTCGAAGGT
ATCGCGATCC ACAGCGAAGA GCTGAACAAC CTGTCCTTCG ACCTGGCCTC GTTCGACCGC
GTTTCGCCGC GAACCGAAGA AAGCCTGAGC AAATTCCGCT CCGAATATGG CGCGATCGAT
GCCGAAGCCG ACCACGTTCA CACCGGCGGC ATCTCGTATC AGCCGTTCGC CAGCCTGACC
ACCAGCCTGT GGGGCACCCA GGCCGAAGAC CTGTGGAACC AGTACTACTT CGGCGCCACC
CACGTGCTGG GTGACAGCTC GGTTCTGGCT CTGACCACCG GTCTGAACTA CTACAAGACC
GTGGACGAAG GTAAGAAAAA ACTCGGTGAA ATCGACAACG ACACCTACTC CCTGTCGTTC
GGTCTGACCC ACCAGGCGCA TACCCTGACC TTCTCCTACC AGGAAGTGAA CGGTAACGAG
TACTTCGACT ACCTGCACGA AACCAACGGC ATCTACCTGG CCAACTCCCT GCTGTCGGAC
TTCAACGGCC CGAACGAGAA ATCCTTCCAG GTGGCCTACG GTCTGAACAT GGCCGAATAC
GGCGTGCCAG GCCTGAAGTT CAACATCTAC CAGGCCCGCG GCTGGGGCAT CGACGGCACT
CACTACAAGG GTGGCGGCTA CGATGGTGTG CAGTCGATGG ATGGCGAGCA CCACTATGAA
TACGGCATCG GCGCCTCTTA TGCCGTACAG AGCGGTCCTC TGAAAGCCAC TACCGTTCGT
GCGACCTACA CCGCGCACCG CGCCAGCGAA AACCAGGCTG ACGGCAGCAT CAACGAGTTC
CGTCTGGTGA CCACCGTTCC GTTCAACATC CTGTAA
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| Protein sequence | MKLSNTAILA LAISSITATA YAETQSQAFT PVTVNEKSAQ AEATGFLEGQ SISGSTRNWY
ANEQLKRGGK FTYRKDGVAT PTDRRINWVQ GTIVKYNSGF TEGTVGFSTE VAAYNAIALE
RDRENLASNN GGAPGTRPGA GNNRTLTREG GEAQGQWSKV GLANVKARIS NTTLTAGRMN
FSSPQVDVIG NRPLPSSFEG IAIHSEELNN LSFDLASFDR VSPRTEESLS KFRSEYGAID
AEADHVHTGG ISYQPFASLT TSLWGTQAED LWNQYYFGAT HVLGDSSVLA LTTGLNYYKT
VDEGKKKLGE IDNDTYSLSF GLTHQAHTLT FSYQEVNGNE YFDYLHETNG IYLANSLLSD
FNGPNEKSFQ VAYGLNMAEY GVPGLKFNIY QARGWGIDGT HYKGGGYDGV QSMDGEHHYE
YGIGASYAVQ SGPLKATTVR ATYTAHRASE NQADGSINEF RLVTTVPFNI L
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