Gene Pfl01_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0743 
Symbol 
ID3715047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp870929 
End bp872656 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content41% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346475 
Protein GI77456970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00289763 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.898724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTG CAGAATCAGT TAACGTAGGT TTCGACGCGA TCCGCGTTTG TGAGGCGATC 
GCAAAAATAG GCTATGAGCC ATACACCGCT ATAATGGATA TTATAGACAA CTCAGTTACC
GCAGAGGCGT CAACTATTTC CATTTCGGTA GAATTGAGAC CAGGAAAAAC GCTAAAGAAT
AGGAATAGTG TATCAAGCTA TAAAATAATG GACGACGGCA AAGGCATGTC TCACGACGAG
ATAGTCAATG CCTTCACCTT AGGTTCGAAA AGAAACTACG GTAAAAACAG CCTTTCGAAG
TATGGCATGG GCCTTAAGTC GGCAGGCCTT TCTCTCGGAA GCAAAATAAC GATCACAAGT
AAAAAAGACG GAGTAATTTC CGACAAGTAC ACTTTCGACC TCGAGGAGAT TGAGAAGGAG
AACAAGCTTG CTTTGATAAG ACAGCCGCTC ACGGAAGCTG AAAAGTTAGA TTTCTCAAGC
GATGTAAACG GCTCAACTGG AACCATTGTA GAGATTGCGG GATGTGAAAA TGTTAATCAA
TCCTCGCCTG GAACCACTTT ATCAAAGTTG AGGGAACGCC TTGGCGTTGT CTACTATACT
TTTCTCAAAG ACGAAGAAAA CCCACTAAGC ATTAGAATCC GAACTGCGCT AAGTGATAAA
AAAGGGGAAT ATGAGGAAAT AAAAGCAAAA GATCTGCTAT TTACTGAAAT GGCAAGTAAA
AATACCGGTT GGTCGCTTGA TAGCTACGAC TTCTTTAGTC CATACCTAAT TCTAGATGAA
GACTGGGATT CGCTGCGGGA TAAAGATAAT AATCCATTAC CGGCTATAAA AATTCAAGCC
GTGGCGTTCC CTCAAGCGAG GATGGCAGAT GAAAAATCCC CACTACCTAT TGACAAAAAA
CTAATTGTAA AAAGCTATGG AGTATCACGC GAGAATAGTG GATTTTTCAT ATACAGAAAT
GGACGCCTTA TACGATGGGG AGATGGATTA GAGCGCGCAA CGGGCAAGCC GCTGATAACC
AAAGACGATA TCAACATTCG GATCAGATTC GAAATTCAAG ATGTGCACGA CGACGTTTTA
CATGTCGACG TTTCAAAGCA GCGCCTAGAA ATTGATGACG AACAAATATA TAACCTTGAG
ACCATTATAT CCAAAGCAAT TCGGATAGCC AAAGAGATCC GCACAGCTTG TCATGAAAAA
ATTAATCTTA AAAAAGGCGA GGGAGAAACG TTTAGCCAGT CGGTGAGAGA TGTACCAGAG
GATGACCCTC AACAGATGGG CAAAGGGGAA GTAGAGCCCG AAACACTTTC ACGACAAGAA
AAGAAAAACG AGGAAGCTCA GTTAGCTCTT GATAAAATAG CAGCTGAGAA AAAAGAAAAT
GGCGACATTC TTGACTTAGA AGCTGACTTT CAAAAAATCA GATACTCAAA TAAGATACCC
TTTGGACAAG TATGGAAACC TTACTTTGAT TCAAAGGAAG GAGTTTTTGT TTGCATAAAC
AAAAACCACC CTTTTTATGA CGTATATTTG AATCGATTTG AAGACGGGTC AAAAGAAAGA
CTAACAGCAG AAGCCTTAAT CTTCGCTTCA GCATTAGCTG AAAGTAATGT TTTTTCTTAT
GAGACCACCG TTACGCAAAG CGATCTAGAA CGGATATTTC GTCGTTTCCA TAGCAACATA
CATCAATTTC TGCAGGATTG GACATGGGAA AACACCTCGG AGGATTAA
 
Protein sequence
MSSAESVNVG FDAIRVCEAI AKIGYEPYTA IMDIIDNSVT AEASTISISV ELRPGKTLKN 
RNSVSSYKIM DDGKGMSHDE IVNAFTLGSK RNYGKNSLSK YGMGLKSAGL SLGSKITITS
KKDGVISDKY TFDLEEIEKE NKLALIRQPL TEAEKLDFSS DVNGSTGTIV EIAGCENVNQ
SSPGTTLSKL RERLGVVYYT FLKDEENPLS IRIRTALSDK KGEYEEIKAK DLLFTEMASK
NTGWSLDSYD FFSPYLILDE DWDSLRDKDN NPLPAIKIQA VAFPQARMAD EKSPLPIDKK
LIVKSYGVSR ENSGFFIYRN GRLIRWGDGL ERATGKPLIT KDDINIRIRF EIQDVHDDVL
HVDVSKQRLE IDDEQIYNLE TIISKAIRIA KEIRTACHEK INLKKGEGET FSQSVRDVPE
DDPQQMGKGE VEPETLSRQE KKNEEAQLAL DKIAAEKKEN GDILDLEADF QKIRYSNKIP
FGQVWKPYFD SKEGVFVCIN KNHPFYDVYL NRFEDGSKER LTAEALIFAS ALAESNVFSY
ETTVTQSDLE RIFRRFHSNI HQFLQDWTWE NTSED