Gene Pfl01_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0728 
Symbol 
ID3715033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp855264 
End bp857183 
Gene Length1920 bp 
Protein Length639 aa 
Translation table11 
GC content64% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_346461 
Protein GI77456956 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGCT GGTTCGGCAA CATCAGCGTG AACCTGAAAC TGGGGCTCGG ATTCGGCCTC 
GTCCTGGCCC TGACCTGCAT CCTGGCACTC ACTGGCTGGA CCAGCCTGGG CGGCCTGATT
GACCGCAGCA ACTGGATGAG CGACATCACC CAGCTCAACG CTGGCCTGAC CAAACTGCGC
GTGGTGCGCC TGCAATACAT GCTGACCAAC GGCGACGAAA CCGCCGCGCA GAACGTGCAG
ACCACCCTCG ACGGGTTCGC CGCCCAACAG CAGAAGCTGA TAAGCAGCTT CAAGAGCCCG
GAAAACGTCA AACTGCTCAA GGAGCAGGCG GCGACCATCG CCGAATACCA GACGTCCCTG
AACAAAATGC GTAACGCCTA CCGCACCGGC AACACGGCGC GCGACTCGAT GGCCACCAGT
GCCGCGACGG CTTACGGCCT GATCGAAGCG CTGAGCAACC GCGTTCAGCA AATGCCGCTG
AGCGATGAAC GTTTCGAGCA GTTCCAGGCC GTCACCGCCG CCAAGGAAGC GTTCATCCTG
GCGCGCTACG AAGTGCGTGG CTACACCGCC ACCGCCAACG CCGAGACCGA GCAGAAAGCC
GTCGGCCAAC TGGACGTGGC CATCGCCAGC CTCAAGCCAC TGAACACGCA TTTCGCCAGC
ACCCAACAGG ACGCCCTGCG TCAGCTGGAA ACCGCACTGA CCAACTACCG CAGCGCCTTG
CAGGCGTTCA AGAACGCCAA CACCGATGCG GTGCAGGCGC GCAAGGAAAT GACCGATCAG
GGCGCGACCA TCGTGACCCT GAGCGAGCAG TTGTATCAGA TCCAGCTCGA TCGCCGTGAT
GCAGAAAGCG CCCAGGCCCG CACCCTGCAA CTGATCAGCA CCCTGCTGGC GTTGCTGGTC
GGCATCATCG CTGCCTTCAT CATCACCCGT CAGATCACCC GTCCGCTGCA GGAAACCATG
GCTGTGGTCG ACCGCATCGC CAGCGGCGAC CTGAGCCACA ACGTGATCGT CACCCGCCGC
GACGAACTCG GCGTGCTGCA ACAAGGCATC GCGCGCATGG GCGTGACCCT GCGCGACCTG
ATCAGCGGCA TCCGCGACGG CGTGACCCAG ATCGCCAGCG CCGCCGAAGA ACTGTCGGCC
GTGACCGAAC AGACCAGCGC CGGCGTGAAC AGCCAGAAGG TCGAGACCGA TCAGGTCGCC
ACCGCGATGC ACGAGATGAC TGCCACTGTG CAGGAAGTCG CGCGCAATGC CGAAGAAGCC
TCGCAAGCCG CAGCCGCCGC TGACGGCGAA GCCCGCGAAG GCGATAAGGT GGTGAACGAA
GCCATCGCCC AGATCGAGCG TCTGGCCAGC GAAGTGGTGC GCTCCACCGA AGCCATGAGC
GTGCTGCAAC AGGAAAGCGA CAAGATCGGC AGCGTCATGG ACGTGATCAA GGCTGTGGCC
GAACAGACCA ACCTGCTGGC CCTCAACGCC GCCATCGAAG CCGCCCGTGC CGGTGAAGCC
GGTCGTGGTT TTGCCGTGGT CGCCGACGAA GTCCGTGGCC TGGCCCAGCG CACGCAGAAA
TCCACCGAGG AAATCGAAGG CCTGGTGGCC GGTCTGCAGA ACGGCACGCA GCAAGTGGCC
GCCGTGATGA ACAACAGCCG CGCCCTGACC GACAGCAGCG TCGCCCTGAC CCGCAAGGCC
GGCGACTCCC TGGAAAACAT CACCCGCACG GTGTCGAACA TCCAGTCGAT GAACCAGCAG
ATCGCCGCAG CCGCCGAACA GCAAAGCGCC GTGGCCGAAG AAATCAGCCG CAGCATCATC
AACGTCCGCG ACGTGTCGGA ACAGACCGCA GCGGCGAGTG ATGAGACGGC CAAGTCCAGC
GTTGAACTGG CGCGGTTGGG TGGGCAGTTG CAGCAGATGG TGAGCCATTT CCGCGTGTAA
 
Protein sequence
MNSWFGNISV NLKLGLGFGL VLALTCILAL TGWTSLGGLI DRSNWMSDIT QLNAGLTKLR 
VVRLQYMLTN GDETAAQNVQ TTLDGFAAQQ QKLISSFKSP ENVKLLKEQA ATIAEYQTSL
NKMRNAYRTG NTARDSMATS AATAYGLIEA LSNRVQQMPL SDERFEQFQA VTAAKEAFIL
ARYEVRGYTA TANAETEQKA VGQLDVAIAS LKPLNTHFAS TQQDALRQLE TALTNYRSAL
QAFKNANTDA VQARKEMTDQ GATIVTLSEQ LYQIQLDRRD AESAQARTLQ LISTLLALLV
GIIAAFIITR QITRPLQETM AVVDRIASGD LSHNVIVTRR DELGVLQQGI ARMGVTLRDL
ISGIRDGVTQ IASAAEELSA VTEQTSAGVN SQKVETDQVA TAMHEMTATV QEVARNAEEA
SQAAAAADGE AREGDKVVNE AIAQIERLAS EVVRSTEAMS VLQQESDKIG SVMDVIKAVA
EQTNLLALNA AIEAARAGEA GRGFAVVADE VRGLAQRTQK STEEIEGLVA GLQNGTQQVA
AVMNNSRALT DSSVALTRKA GDSLENITRT VSNIQSMNQQ IAAAAEQQSA VAEEISRSII
NVRDVSEQTA AASDETAKSS VELARLGGQL QQMVSHFRV