| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0686 |
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| Symbol | |
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| ID | 3714303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 800901 |
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| End bp | 802394 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_346419 |
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| Protein GI | 77456914 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000335425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTA TCCCGCATTT GATCAATGGC GAACTGGTGA CCGAGAACGG TCGCGCGGTC
GATGTGTTCA ACCCGTCCAC CGGTCAGGCT ATCCACAAGC TGCCGCTGGC CAGCCGCGAA
ACCATCCAGC ACGCCATCGA TGCCGCCAAG GCTGCGTTCC CGGCCTGGCG CAATACGCCA
CCGGCCAAAC GTGCCCAGGT GATGTTCCGT TTCAAGCAAC TGCTGGAGCA GAACGAAGCA
CGCATCGCGC AGTTGATCAG CGAAGAACAC GGCAAGACCC TGGAAGATGC TGCCGGTGAA
CTGAAGCGCG GTATCGAGAA CGTCGAGTTC GCCTGCGCAG CGCCGGAAAT CCTCAAGGGC
GAGTACAGCC GCAACGTCGG CCCGAACATC GATGCGTGGT CGGACTTCCA GCCGCTGGGC
GTGGTGGCCG GCATTACGCC GTTCAACTTC CCGGCGATGG TGCCGCTGTG GATGTATCCG
TTGGCGATCG TCTGCGGCAA CTGCTTCATC CTCAAACCCT CCGAGCGTGA TCCGAGCTCG
ACCCTGCTGA TCGCACAACT GTTGCTGGAA GCCGGTCTGC CGAAAGGCGT GCTGAGCGTC
GTGCACGGTG ACAAGACTGC GGTAGACGCG CTGATCGAAG CGCCGGAAGT CAAAGCGCTG
AGCTTTGTGG GTTCGACACC GATTGCCGAG TACATCTATG CGGAAGGCAC CAAACGCGGC
AAGCGCGTGC AGGCCTTGGG CGGCGCGAAG AACCACGCGG TGCTGATGCC GGATGCGGAT
CTGGACAACG CGGTCAGCGC ACTGATGGGC GCGGCTTACG GTTCCTGCGG CGAACGCTGC
ATGGCGATTT CGGTGGCCGT GTGTGTGGGC GATCAGGTGG CGGACGCACT GGTGGCCAAA
CTGGTTCCTC AGATCAAGGC GCTGAAAATC GGTGCCGGCA CTTCGTGTGG TCTGGACATG
GGGCCTCTGG TGACCGGTCA GGCGCGCGAC AAGGTCAGCG GTTATGTGGA GGACGGCGTG
GCGGCGGGTG CGACCCTGGT GGTCGACGGT CGTGGTCTGA GCGTTGCCGG TCATGAAGAA
GGCTTCTTCC TCGGTGGTTG CCTGTTCGAC AACGTCACTC CTGAAATGCG CATCTATAAA
GAAGAGATCT TCGGGCCGGT GCTGTGCGTG GTCCGGGTGA ACAGCCTGGA AGAGGCGATG
CAACTGATCA ACGATCACGA ATACGGCAAC GGCACCTGCA TCTTTACCCG TGACGGTGAG
GCGGCACGCC TGTTCTGCGA CGAGATCGAA GTCGGCATGG TCGGCGTCAA CGTTCCATTG
CCGGTGCCGG TGGCTTACCA CAGCTTCGGC GGCTGGAAGC GTTCGTTGTT CGGCGACTTG
CATGCCTACG GTCCGGATGG CGTGCGCTTT TACACCCGTC GCAAGGCGAT CACCCAGCGC
TGGCCGCAGC GTGCGAGCCA TGAAGCTTCG CAGTTTGCAT TCCCTAGCTT GTAA
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| Protein sequence | MSVIPHLING ELVTENGRAV DVFNPSTGQA IHKLPLASRE TIQHAIDAAK AAFPAWRNTP
PAKRAQVMFR FKQLLEQNEA RIAQLISEEH GKTLEDAAGE LKRGIENVEF ACAAPEILKG
EYSRNVGPNI DAWSDFQPLG VVAGITPFNF PAMVPLWMYP LAIVCGNCFI LKPSERDPSS
TLLIAQLLLE AGLPKGVLSV VHGDKTAVDA LIEAPEVKAL SFVGSTPIAE YIYAEGTKRG
KRVQALGGAK NHAVLMPDAD LDNAVSALMG AAYGSCGERC MAISVAVCVG DQVADALVAK
LVPQIKALKI GAGTSCGLDM GPLVTGQARD KVSGYVEDGV AAGATLVVDG RGLSVAGHEE
GFFLGGCLFD NVTPEMRIYK EEIFGPVLCV VRVNSLEEAM QLINDHEYGN GTCIFTRDGE
AARLFCDEIE VGMVGVNVPL PVPVAYHSFG GWKRSLFGDL HAYGPDGVRF YTRRKAITQR
WPQRASHEAS QFAFPSL
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