Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0670 |
Symbol | |
ID | 3713955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 783828 |
End bp | 785207 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | general substrate transporter |
Protein accession | YP_346403 |
Protein GI | 77456898 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.753041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACGG GAAACTTCAG CGCGGCAGAT CGACTGGAGC GCCTGCCAGT CAGCGGTTAT CACCGGATCA TCTTCATCAT CATCGCCCTG GCGTTTTTCT TCGACTCCAT GGATCTGGCG ATGATGACTT TCCTGCTCGG CTCGATCAAA GCCGAGTTCG GCCTGAGCAG TGCGCAGGCC GGCCTGCTGG CCAGTTCGAG TTTTTTCGGC ATGGTGCTGG GGGCGTCGCT GTCCGGTCTG TTGGCTGATC GGTTCGGTCG CAAACCGGTG TTCCAGTGGA GCATCGTCCT GTGGGGGCTG GCCAGTTACC TGTGTTCCAC GGCGCAGACG GTCGAGAGCC TGACGCTGTT TCGCATTCTG CTGGGAATCG GCATGGGCAT GGAGTTTCCG ATTGCCCAGT CGATGCTGTC GGAGTTGATC CCCGCCCAGC GTCGGGGTCG TTATATCGCG TTGATGGACG GTTTCTGGCC GCTGGGTTTT GTGGCTGCCG GGGTGCTGTC GTATTTCCTG CTGCCATTGA TTGGCTGGCG CGACATCTTT CTGGTGCTGG CGGTGCCGGC GGTGTTCGTC CTGGCGATCC GCTTTTTCAT TCCCGAGTCG CCGCGCTGGC TGGAACAGGC CGGCAAGCAT GACGAGGCGG ACAAGGTTTT ACGCGGCATC GAGGCGCGGG TACAGGCCTC ACTCGGTGGT GCCGCATTGC CGGAGCCGGT TCGCCTGCCG CGAAGCGTGA CACCTCCGGG CCATTTCCTT TCGGCGCTCA AACAGATCTG GTCGCCGCTG TATCGCCAGC GCACGACGAT GATCTGGAGC CTGTGGTTCT TCGCGTTGCT CGGTTTTTAC GGCCTGACCT CGTGGCTCAG CGCGTTGCTG CAACAATCGG GTTTTGCCGT GACTCAGTCG GTGTATTACA CCGTGCTGAT TTCCCTCGGC GGGATTCCCG GCTTCCTGAT GGCGGCCTGG CTGGTGGAGC GTTGGGGCCG CAAGCCGGTG TGCATCGTCA CGTTGCTCGG CGGTGGGGTG ATGGCGTTTC TGTACGGACA AAGCGCCGTG TTTGGCGGTA ACGTGGCGCT GCTGATCGGT ACGGGGCTGT TGATGCAGTT TTTCCTGTTC GGCATGTGGG CGGTGCTCTA CACCTACACG CCGGAGCTGT ATCCGACCTC GGCGCGGGCG ACGGGCTCGG GGTTCGCCTC GGCCATTGGA CGCGTAGGTT CTCTGCTCGG GCCATTGGTC ACCGGGCTGG TGTTCCCGAT CACCGGGCAG GGCGGAGTGT TTGCGCTGGG AGCGTTGTGC TTTACGATTG CGGCGGGGGT GGTGTGGCTG TTCGGGATGG AGACCCGGGG CAAGACGCTG GAAGAGTTGA CTGAAGCGGT TGTGCGCTGA
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Protein sequence | MDTGNFSAAD RLERLPVSGY HRIIFIIIAL AFFFDSMDLA MMTFLLGSIK AEFGLSSAQA GLLASSSFFG MVLGASLSGL LADRFGRKPV FQWSIVLWGL ASYLCSTAQT VESLTLFRIL LGIGMGMEFP IAQSMLSELI PAQRRGRYIA LMDGFWPLGF VAAGVLSYFL LPLIGWRDIF LVLAVPAVFV LAIRFFIPES PRWLEQAGKH DEADKVLRGI EARVQASLGG AALPEPVRLP RSVTPPGHFL SALKQIWSPL YRQRTTMIWS LWFFALLGFY GLTSWLSALL QQSGFAVTQS VYYTVLISLG GIPGFLMAAW LVERWGRKPV CIVTLLGGGV MAFLYGQSAV FGGNVALLIG TGLLMQFFLF GMWAVLYTYT PELYPTSARA TGSGFASAIG RVGSLLGPLV TGLVFPITGQ GGVFALGALC FTIAAGVVWL FGMETRGKTL EELTEAVVR
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