Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0648 |
Symbol | |
ID | 3713564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 759052 |
End bp | 760320 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | type II and III secretion system protein |
Protein accession | YP_346381 |
Protein GI | 77456876 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAAAC GCTTTACGCC CCTGTTCCAC TGGCTGCAGT TTTCCTTGCT GAGCGTGGCT TCGATCGGCA GCGCGGCCGC CGCCACCGGC AACTGCGCTG CGCTTGCGCC GCTACCGGCC GTGCTGGAAG TCGGTGAAGG CCTGCAACAG GCCGTGCAAT CGCCGGTGGC GATCACTCGG GTGGCCGTGG GCGATCCGAA GATCGCCGAT GTGCGCGTGA CCGGCGATCA GGGTGTGTTG CTCACCGGCG TCGGCCCCGG CGCCACCACG TTGATGATCT GGACCGCCTG CGCCAGCACA CCGCGTCAAA GCATGGTGTT CGTGCAGGGC AAGGCCAGTG CGGCGATGAC TGCGGCGGCG CTGCCGTCCA GCAGCGAACC GAACCTGCCC TCGCAAGTGC AGACAGACAT CCGCTTCGTC GAAGTCAGCC GCACCAAACT CAAGGAAGCG GGTACGTCGA TCTATGGCAA AGGCTCCAAC AATTTTCTGT TCGGCGCCCC GGGCACCGTG CCGAACACCG GGGTCACGCC GGGTGTGGTT CCGTTGCTCA ACATCGACCC ACGCATCGCC GCGCCGAGCA TTCCGCTGGC CAACGACATG TTCAACATCG TCTGGGGCGG TGGCAGCAGC AAGTTCCTCG GCATCGTCAA CGCGCTGGAA GGCAGCGGTT TCGCCTACAC CCTCGCGCGG CCAAGCCTGG TTGCCTTGAG CGGACAGAGT GCGAGTTTCC TCGCCGGTGG CGAGGTGCCG ATCCCGGTGC CCAGCGCCAA CAGCAACAGC TACTCCATCG AGTACAAGGA ATTCGGTATC CGCCTGACCC TGACCCCGAC CGTGGTCAGC AACGACCGGA TCGCCCTCAA GGTCGCCCCG GAAGTCAGTG AGCTGGACTA CAACAACGGC GTGACCATCG GCGGCACCAA AGTGCCGGCC TTCACCATTC GCCGCACCGA CACCAGCATC TCCCTGGCAG ACGGCGAAAG CTTCGTCATC AGCGGCCTGA TCAGTACCCG CAATGCCTCG GAGGTGAACA AGTTTCCGGG GCTGGGCGAC ATTCCGGTAC TCGGCGCGTT TTTCCGCAAC TCGTCGATCA ACCGCGAAGA ACGCGAGCTG CTGATGATCG TCACCCCGCA CCTGGTGCAG CCGCTGGCCG TCAACGCGCC ATTGCCGTCG TTGCCCGGCG AGAAACTGCG CAATTACGAC CCGAACTGGT ATCGCCTGTA CTTCCTGGAA AACGGCAACT TCGATAAACG CAGCGGGTTA TCGCAATGA
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Protein sequence | MRKRFTPLFH WLQFSLLSVA SIGSAAAATG NCAALAPLPA VLEVGEGLQQ AVQSPVAITR VAVGDPKIAD VRVTGDQGVL LTGVGPGATT LMIWTACAST PRQSMVFVQG KASAAMTAAA LPSSSEPNLP SQVQTDIRFV EVSRTKLKEA GTSIYGKGSN NFLFGAPGTV PNTGVTPGVV PLLNIDPRIA APSIPLANDM FNIVWGGGSS KFLGIVNALE GSGFAYTLAR PSLVALSGQS ASFLAGGEVP IPVPSANSNS YSIEYKEFGI RLTLTPTVVS NDRIALKVAP EVSELDYNNG VTIGGTKVPA FTIRRTDTSI SLADGESFVI SGLISTRNAS EVNKFPGLGD IPVLGAFFRN SSINREEREL LMIVTPHLVQ PLAVNAPLPS LPGEKLRNYD PNWYRLYFLE NGNFDKRSGL SQ
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