| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0615 |
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| Symbol | |
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| ID | 3712125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 723085 |
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| End bp | 724095 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_346348 |
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| Protein GI | 77456843 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.150397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCGG TACGCATCGG CCCATATACA TTGCAGAACG GCTTGATCCT CGCCCCGATG
GCGGGTGTCA CCGACCAGCC CTTTCGTCAG CTGTGCAAGC GTTTGGGCGC AGGGCTTGTA
GTGTCGGAAA TGGTCACCAG TGACATGAGC CTGTGGAACA CCCGCAAGTC GCGCATGCGC
ATGATCCACG AAGGCGATCC CGAGCCGCGC TCGGTGCAGA TCGCCGGTGG CGATGCGCAG
ATGCTGGCGG ATGCGGCCCG GGCGAACGTC GAACTGGGCG CACAGATTAT TGATATCAAC
ATGGGTTGCC CGGCGAAGAA GGTCTGCAAC AAGGCCGCCG GCTCCGCGTT GTTGAAGGAT
GAGGCACTGG TTACCGAGAT CCTGAACGCC GTTGTGGCGG CGGTTGATGT GCCGGTGACC
CTGAAGATCC GCACCGGATG GGATCGCGAC AACAAGAACG GCCTGACCGT GGCGAAGATC
GCCGAGCAGG CCGGGATCAC GGCGCTGGCG GTGCATGGCC GCACCCGCGC CGACCTGTAC
ACCGGTGAAG CCGAGTACGA CACCATCGCC GCGATCAAGC AGGCGGTGTC GATTCCGGTC
TTTGCCAACG GCGACATCGT ATCGCCGGAA AAGGCCCGCT ACGTGCTCGA CGCGACCGGT
GCCGATGGCC TGTTGATCGG CCGGGCTGCC CAGGGGCGGC CATGGATTTT TCGCGAGATC
GAACACTTCC TGCGTACCGG CGAAAAACTG CCGGCGCCGG AGCTGATCGA GGTGGAACGC
ATTCTGCTTG AGCATCTGGC CGCCCTTCAC GCCTTCTATG GGGACGTGAT GGGTGTGCGA
ATTGCCCGCA AGCATGTGGG CTGGTATCTC GCAACCTTGC CGGGCGCCAG GGAATTTCGC
GCCCACTTCA ATCGTTTGGA TGGTACGGAA ACACAATGCG CCAACGTTCG GGAGTTCTTC
GCCGAACGTT ACAAGAGCCT GACAGGGGAC GGAGAAGGGG TGGCCGCATG A
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| Protein sequence | MSAVRIGPYT LQNGLILAPM AGVTDQPFRQ LCKRLGAGLV VSEMVTSDMS LWNTRKSRMR
MIHEGDPEPR SVQIAGGDAQ MLADAARANV ELGAQIIDIN MGCPAKKVCN KAAGSALLKD
EALVTEILNA VVAAVDVPVT LKIRTGWDRD NKNGLTVAKI AEQAGITALA VHGRTRADLY
TGEAEYDTIA AIKQAVSIPV FANGDIVSPE KARYVLDATG ADGLLIGRAA QGRPWIFREI
EHFLRTGEKL PAPELIEVER ILLEHLAALH AFYGDVMGVR IARKHVGWYL ATLPGAREFR
AHFNRLDGTE TQCANVREFF AERYKSLTGD GEGVAA
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