Gene Pfl01_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0593 
Symbol 
ID3712311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp684870 
End bp685658 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_346326 
Protein GI77456821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.835078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCAC TGTCCCTCAC CGATCTCGCC TGGACACCTC TGGGCCACGG CCATTGCCAT 
CACCAGTTCC AGCTGCGTGA CGCCTCGTTG CAAGTGGCCG CCGGTGAGTT CGTCGGGCTG
ATCGGGCCCA ACGGCAGCGG CAAGACCAGC CTGTTGCGCT GCGCCTATCG CTTCAGTCAG
CCGGAACACG GTGAGGTCAG GCTCGATCAC CACAACGTGT GGAAACAATC CTCGCGCTGG
TGCGCGCAAC GCATCGCTGT GGTGCTGCAG GAGTTCCCCG ACGCCTTCGG CCTGACCGTC
GAAGAAGTGG TCGCCATGGG CCGCACGCCG CACAAAGGCC TGTTCGATGG CGACACGCTG
GAAGACCGCA ATCTCGCTAC CCAGGCCCTC AAATCCGTGG GCCTCGACGG CTTCGAAGAC
CACGCGTTCG CCACGCTGTC CGGTGGAGAA AAACAGCGAG TGATCCTCGC CCGCGCCCTG
ACCCAGCAAC CGCAACTGCT GATCCTCGAC GAGCCGACCA ACCACCTCGA CCCGCGCTAT
CAGCTGGAGC TGCTGCAACT GGTCAAGCGC TTGCAGATCG GCACGTTGGC GAGCATCCAC
GACCTGAACC TGGCTGCCGC GTTCTGCGAC CGTTTGTATG TGATCAACCA CGGCCGGATC
GTCGCCAGCG GCACGCCGCA GGAAGTGCTC ACCGTAGAAC TGCTGCGCGA CGTGTTCGGC
GTCGAAGCAT TGATCGATTC CCACCCCCTC CACGGCTACC CGCGAATCAC CTGGATAACC
CGACCATGA
 
Protein sequence
MSSLSLTDLA WTPLGHGHCH HQFQLRDASL QVAAGEFVGL IGPNGSGKTS LLRCAYRFSQ 
PEHGEVRLDH HNVWKQSSRW CAQRIAVVLQ EFPDAFGLTV EEVVAMGRTP HKGLFDGDTL
EDRNLATQAL KSVGLDGFED HAFATLSGGE KQRVILARAL TQQPQLLILD EPTNHLDPRY
QLELLQLVKR LQIGTLASIH DLNLAAAFCD RLYVINHGRI VASGTPQEVL TVELLRDVFG
VEALIDSHPL HGYPRITWIT RP