Gene Pfl01_0545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0545 
Symbol 
ID3712940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp637777 
End bp638364 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346278 
Protein GI77456773 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.635717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.407351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCTCA CATCCGTTTG TGTATTTTGC GGTGCCAACG CTGGCACCAT CCCGGCGTAC 
ACCGAAGCCG CGATCGCCCT CGGCACGGCT ATCGCCGAGC GTAAGCTGAC GCTGGTCTAC
GGCGGTGGCG CCGTCGGCCT GATGGGGATT ATCGCTGACG CCGCGCTGGC GGCCGGTGGC
GAGGTGATCG GCATCATCCC GCAGAGCCTG ATGGACAAGG AAATCGGTCA CAAGAGCCTG
ACGCGTCTGG AAGTGGTCGA CGGCATGCAC GCGCGCAAGG CGAGGATGGC CGAACTCAGC
GATGCGTTCA TCGCCCTGCC CGGTGGCCTC GGCACCCTGG AAGAGTTGTT CGAAGTCTGG
ACCTGGGGCC AGCTCGGCTA CCACGGCAAG CCGCTCGGCC TGCTCGAGGT GAACGGTTTC
TACAGCAAAC TCACTGCATT TCTCGATCAC ATCGTCGGCG AAGGCTTCGT TCGCGCGCCA
CACCGTGACA TGCTGCAAGT GAGCGAATCG CCGCAAACGC TGCTCGAAGC CCTCGATCAA
TGGCAGCCGA CCGTCACGCC AAAGTGGGTC GACCAGAAAC CCGGTTAA
 
Protein sequence
MSLTSVCVFC GANAGTIPAY TEAAIALGTA IAERKLTLVY GGGAVGLMGI IADAALAAGG 
EVIGIIPQSL MDKEIGHKSL TRLEVVDGMH ARKARMAELS DAFIALPGGL GTLEELFEVW
TWGQLGYHGK PLGLLEVNGF YSKLTAFLDH IVGEGFVRAP HRDMLQVSES PQTLLEALDQ
WQPTVTPKWV DQKPG