Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0540 |
Symbol | |
ID | 3713010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 628114 |
End bp | 630417 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_346273 |
Protein GI | 77456768 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.212733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.530642 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCAG CCAAGCCGTT ATTTGACTAT CCAAAATATT GGGCCGAATG TTTCGGGCCA GCGCCGTTCC TGCCGATGAG CAGGGAGGAG ATGGATCAGC TTGGCTGGGA TTCCTGCGAC ATCATCATTG TCACGGGTGA TGCCTACGTC GATCACCCGT CGTTCGGCAT GGCGATCATC GGCCGGCTGC TGGAGTCGCA AGGCTTCCGC GTCGGGATCA TCGCGCAGCC GAACTGGCAG TCCAAAGACG ACTTCATGAA GCTCGGCGAG CCGAACCTGT TCTTCGGCGT CGCGGCCGGC AACATGGACT CAATGATCAA CCGCTACACC GCGGACAAGA AAATCCGTTC CGACGACGCC TATACCCCAG GCGGCATGGC CGGCAAACGT CCGGACCGCG CGAGCCTGGT TTACAGCCAG CGCTGCAAGG AAGCCTACAA GCACGTGCCG ATCGTGCTCG GCGGCATCGA AGCCTCCCTG CGCCGCATCG CCCACTACGA CTACTGGCAG GATCGCGTAC GCAACTCGAT CCTGATCGAC GCCAGCGCCG ACATCCTGCT GTACGGCAAC GCCGAGCGGG CGATTGTCGA AGTCGCCCAG CGTCTGTCCT ACGGTCACAA GATAGAAGAC ATCACCGATG TGCGCGGCAC CGCGTTCATC CGTCGTGACA CCCCTGCGGG CTGGTACGAA GTCGACTCCA CGCGCATCGA CCGTCCGGGC AAGATCGACA AGATCATCAA CCCGTACGTC AACACCCAGG ACACTCAGGC CTGCGCCATC GAGCAGGAGA AGGGGCCGGT TGAAGACCCG GAAGAAGCCA AGGTCGTACA GATCCTGGCC AGCCCGAAAA TGACCCGCGA CAAGACCGTG ATCCGCCTGC CGTCGATGGA AAAGGTGCGT AACGACCCGG TCCTGTACGC CCACGCCAAC CGCGTGCTGC ACCTGGAAAC CAACCCGGGC AATGCCCGTG CGCTGGTGCA GAAGCATGGC GAGATCGACG TCTGGTTCAA CCCGCCGCCG ATTCCGATGA CCACCGAAGA AATGGACTAT GTGTTCGGCA TGCCTTACGC ACGTGTTCCG CACCCTGCGT ACGGCAAGGA AAAAATCCCG GCCTACGACA TGATCCGCTT CTCGGTGAAC ATCATGCGTG GCTGCTTCGG TGGCTGCACG TTCTGCTCGA TCACCGAGCA CGAAGGCCGG ATCATCCAGA ACCGTTCCGA AGAGTCGATC ATTCGCGAAA TCGAAGAAAT CCGCGACAAG GTGCCGGGTT TCACTGGCGT CATTTCCGAC CTCGGCGGCC CGACCGCGAA CATGTACCGC ATCGCCTGCA AGAGCCCGGA AATCGAATCC GCGTGCCGCA AGCCGTCCTG CGTGTTCCCG GGCATCTGCC CGAACCTGAA CACCGACCAC TCGTCGCTGA TCCAGCTCTA TCGCAGCGCC CGTGCGCTGC CGGGTGTGAA GAAGATCCTG ATCGCCTCCG GCCTGCGTTA CGACCTTGCG GTCGAGTCGC CGGAGTACGT CAAGGAGCTG GTGACGCACC ACGTCGGTGG TTACCTGAAG ATCGCCCCGG AACACACCGA GGAAGGTCCG CTCAACCAGA TGATGAAACC GGGGATCGGC ACCTACGATC GCTTCAAGCG CATGTTCGAG AAGTACACCA AGGAAGCCGG GAAAGAGCAG TACCTGATTC CGTACTTCAT TGCCGCGCAC CCGGGCACCA CCGACGAAGA CATGATGAAC TTGGCCCTGT GGCTCAAGGG TAACGGCTTC CGTGCCGACC AGGTCCAGGC GTTCTATCCG TCGCCGATGG CTACCGCCAC CGCGATGTAC CACTCGGGCA AGAACCCGCT GCGCAAGGTC ACCTACAAGA GCGACGGCGT GACCATCGTC AAGAGCGAGG AGCAGCGCCG TCTGCACAAG GCGTTCCTGC GTTATCACGA CCCGAAAGGC TGGCCGATGC TGCGTGAAGC GCTGACCCGC ATGGGCCGCG CCGACCTGAT CGGGCCGGGC AAGCACCAGT TGATCCCGCT GCACCAGCCG GCCACCGACA GCTACCAGAG TGCCCGTCGC AAGAACTCGA CCCCGGCCGG CAGCCACAAG GTCGCGAAAG AGAAGACCAC CAAGATCCTC ACCCAGCACA CCGGTCTGCC ACCGCGCGCC AGTGACGGCG GCAATCCATG GGACAAGCGT GAACAGGCCA AGGCCGCGGC GTTCGCCCGC AACCAGCAGG CCGCCAAGGA ACGCAAGGAA GCGGCGAAAG GCAAAGGGCC GAAACCGGCA CGCAAGCCGG TCGTACCGCG TTGA
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Protein sequence | MQAAKPLFDY PKYWAECFGP APFLPMSREE MDQLGWDSCD IIIVTGDAYV DHPSFGMAII GRLLESQGFR VGIIAQPNWQ SKDDFMKLGE PNLFFGVAAG NMDSMINRYT ADKKIRSDDA YTPGGMAGKR PDRASLVYSQ RCKEAYKHVP IVLGGIEASL RRIAHYDYWQ DRVRNSILID ASADILLYGN AERAIVEVAQ RLSYGHKIED ITDVRGTAFI RRDTPAGWYE VDSTRIDRPG KIDKIINPYV NTQDTQACAI EQEKGPVEDP EEAKVVQILA SPKMTRDKTV IRLPSMEKVR NDPVLYAHAN RVLHLETNPG NARALVQKHG EIDVWFNPPP IPMTTEEMDY VFGMPYARVP HPAYGKEKIP AYDMIRFSVN IMRGCFGGCT FCSITEHEGR IIQNRSEESI IREIEEIRDK VPGFTGVISD LGGPTANMYR IACKSPEIES ACRKPSCVFP GICPNLNTDH SSLIQLYRSA RALPGVKKIL IASGLRYDLA VESPEYVKEL VTHHVGGYLK IAPEHTEEGP LNQMMKPGIG TYDRFKRMFE KYTKEAGKEQ YLIPYFIAAH PGTTDEDMMN LALWLKGNGF RADQVQAFYP SPMATATAMY HSGKNPLRKV TYKSDGVTIV KSEEQRRLHK AFLRYHDPKG WPMLREALTR MGRADLIGPG KHQLIPLHQP ATDSYQSARR KNSTPAGSHK VAKEKTTKIL TQHTGLPPRA SDGGNPWDKR EQAKAAAFAR NQQAAKERKE AAKGKGPKPA RKPVVPR
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