Gene Pfl01_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0533 
Symbol 
ID3713003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp620695 
End bp621462 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID 
ProductRNA methyltransferase TrmH, group 3 
Protein accessionYP_346266 
Protein GI77456761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0666066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT TGGAAAAAAT CTACGGCGTT CACGCGGTAG AAGCGTTGCT GCGTCACCAC 
CCTAAACGCG TCAAGCAGAT CTGGCTGGCT GAAAGCCGCA ACGATCCGCG CGTGCAGACG
CTGATCGAGC TGGCCAACGA AAACCGGGTT CAGATCGGTC AGGCCGAGCG CCGCGAAATG
GACGCCTGGG TCGAAGGCGT GCACCAGGGC GTGGTGGCGG ACGTCAGTCC GAGCCAGGTC
TGGGGCGAAG CGATGCTCGA CGAGCTGCTT GATCGCACCG AGGGCGCGCC GTTGCTGTTG
GTGCTCGACG GCGTGACCGA CCCGCACAAC CTCGGCGCCT GCCTGCGTTC GGCGGATGCT
GCCGGTGCGC TGGCGGTCAT CGTGCCAAAA GACAAGTCGG CCACCCTGAC CCCTGTGGTG
CGTAAAGTGG CTTGCGGCGC GGCGGAAGTG ATTCCGCTGG TGGCCGTCAC CAACCTTGCG
CGCACCCTGG AAAAGCTTCA GCAGCGCGGG TTGTGGATTG TCGGCACGGC GGGTGAGGCC
GAGGTCAGCA TCTATGACCA GGACCTGACC GGCCCGACCA TTCTGATCAT GGGCGCCGAA
GGCAAAGGCA TGCGTCGCCT GACCCGCGAG CATTGCGATT ACCTGGTGCA TTTGCCGATG
GCCGGTAGCG TCAGCAGTCT CAACGTGTCG GTTGCGACGG GTGTCTGCCT GTTCGAGGCC
CAGCGCCAGC GTGGTGCCAA GGCCAAGGCG GCTGCCAAGA AGGCTTAA
 
Protein sequence
MSQLEKIYGV HAVEALLRHH PKRVKQIWLA ESRNDPRVQT LIELANENRV QIGQAERREM 
DAWVEGVHQG VVADVSPSQV WGEAMLDELL DRTEGAPLLL VLDGVTDPHN LGACLRSADA
AGALAVIVPK DKSATLTPVV RKVACGAAEV IPLVAVTNLA RTLEKLQQRG LWIVGTAGEA
EVSIYDQDLT GPTILIMGAE GKGMRRLTRE HCDYLVHLPM AGSVSSLNVS VATGVCLFEA
QRQRGAKAKA AAKKA