Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0515 |
Symbol | |
ID | 3713156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 597324 |
End bp | 597866 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | oligoribonuclease |
Protein accession | YP_346248 |
Protein GI | 77456743 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.460562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.421617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAACC CGCAGAATCT GATCTGGATC GACCTCGAAA TGACCGGTCT CGATCCGGAA AACGACGTCA TCATCGAGAT GGCCACCATC GTCACCGACA GTGACCTGAA CACTTTGGCC GAAGGCCCGG TGATCGCCAT CCACCATAGC GACGAAGTCC TCGCCCGCAT GGACGAGTGG AACACCCGCA CCCACGGCAA CTCCGGCCTG ACCCAGCGCG TGCGTGAAAG CCGTGTGAGC ATGGCCGAGG CTGAAGCCGA AACCATCGCC TTCCTCGAAC AGTGGGTGCC GAAGGGCAAG TCGCCGATCT GTGGCAACAG CATCTGCCAG GATCGCCGCT TCCTTTATAC CCACATGAAG GCGCTGGAAA GCTACTTCCA CTACCGCAAC CTCGACGTCT CCACGCTCAA GGAGCTGGCC GCGCGCTGGG CGCCGGACGT GCGTGACAGC TTCAAGAAGG GCAGCACTCA CCTCGCACTG GATGACATCC GCGAGTCGAT TGCCGAGCTG CAGCACTACC GCAAGCATTT CATCAAGTTC TGA
|
Protein sequence | MQNPQNLIWI DLEMTGLDPE NDVIIEMATI VTDSDLNTLA EGPVIAIHHS DEVLARMDEW NTRTHGNSGL TQRVRESRVS MAEAEAETIA FLEQWVPKGK SPICGNSICQ DRRFLYTHMK ALESYFHYRN LDVSTLKELA ARWAPDVRDS FKKGSTHLAL DDIRESIAEL QHYRKHFIKF
|
| |