Gene Pfl01_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0515 
Symbol 
ID3713156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp597324 
End bp597866 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content60% 
IMG OID 
Productoligoribonuclease 
Protein accessionYP_346248 
Protein GI77456743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.460562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.421617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACC CGCAGAATCT GATCTGGATC GACCTCGAAA TGACCGGTCT CGATCCGGAA 
AACGACGTCA TCATCGAGAT GGCCACCATC GTCACCGACA GTGACCTGAA CACTTTGGCC
GAAGGCCCGG TGATCGCCAT CCACCATAGC GACGAAGTCC TCGCCCGCAT GGACGAGTGG
AACACCCGCA CCCACGGCAA CTCCGGCCTG ACCCAGCGCG TGCGTGAAAG CCGTGTGAGC
ATGGCCGAGG CTGAAGCCGA AACCATCGCC TTCCTCGAAC AGTGGGTGCC GAAGGGCAAG
TCGCCGATCT GTGGCAACAG CATCTGCCAG GATCGCCGCT TCCTTTATAC CCACATGAAG
GCGCTGGAAA GCTACTTCCA CTACCGCAAC CTCGACGTCT CCACGCTCAA GGAGCTGGCC
GCGCGCTGGG CGCCGGACGT GCGTGACAGC TTCAAGAAGG GCAGCACTCA CCTCGCACTG
GATGACATCC GCGAGTCGAT TGCCGAGCTG CAGCACTACC GCAAGCATTT CATCAAGTTC
TGA
 
Protein sequence
MQNPQNLIWI DLEMTGLDPE NDVIIEMATI VTDSDLNTLA EGPVIAIHHS DEVLARMDEW 
NTRTHGNSGL TQRVRESRVS MAEAEAETIA FLEQWVPKGK SPICGNSICQ DRRFLYTHMK
ALESYFHYRN LDVSTLKELA ARWAPDVRDS FKKGSTHLAL DDIRESIAEL QHYRKHFIKF