| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0481 |
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| Symbol | |
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| ID | 3713238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 557590 |
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| End bp | 559392 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Lipid A export ATP-binding/permease protein MsbA |
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| Protein accession | YP_346214 |
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| Protein GI | 77456709 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT CCAGTCCCGC CGCAAGCCCT TCGAGCTTGA AAATCTACTT CCGCCTGCTC
GGCTATGTCC GGCCGTACAT CAGTCTGTTC CTGATCAGCA TCGTCGGTTT TCTGATTTTT
GCCTCGACCC AGCCGATGCT CGGCTACATC CTCAAGTACT TTGTCGACGG TCTGTCCAAT
CCCGAGGCAG TGCTGTTTCC CACCGTGCCT TACCTGCGCG ACCTGCAACT GCTGCAGGCC
GTACCGTTGC TGATCATCCT GATCGCCGCG TGGCAGGGGC TGGGATCTTA TCTGGGCAAC
TATTTCCTGG CCAAGGTTTC CCTGGGCCTG GTGCATGACC TGCGGGTTCA GCTCTTCAAC
AACCTGCTGG TCCTGCCCAA CCGGTATTTC GACAAGCATA ACTCCGGACA TCTGATTTCG
CGTATCACCT TCAACGTGAC AATGGTCACG GGGGCGGCAA CAGATGCGAT CAAGGTCGTA
ATCCGTGAAG GCATGACGGT GATCTTCCTG TTCGCCTCCC TGCTGTTCAT GAACTGGAAG
CTGACGCTGG TGATGGTTGC GATCCTGCCG CTGATCGCCG TAATGGTGCG CACTGCCAGC
AAGAAATTCC GCAAGCAGAG CAAGAAAATC CAGCTGGCCA TGGGCGACGT GACCCACGTC
GCCTCGGAAA CCATCCAGGG CTATCGCGTG GTGCGCAGCT TCGGTGGCGA AGCCTACGAG
GAAAAACGCT TTCTCGATGC CAGCCAGGGC AACACCGACA AGCAGTTGCG CATGACCCGC
ACCGGGGCCA TCTACACGCC GCTGCTGCAG CTGGTGATCT ACAGCGCCAT GGCGATCCTG
ATGTTCCTCG TGCTGTACCT TCGCGGCGAT GCGTCGGCCG GTGATATGGT GGCCTACATC
ACGCTGGCGG GCCTGCTGCC CAAGCCGATC CGCCAGTTGT CCGAAGTCAG TTCGACCATC
CAGAAGGGCG TGGCCGGTGC CGAAAGCATT TTCGAGCAAC TGGACGTCGA ACCGGAGGTC
GATACCGGCA CGGTCGAGCG CGACTCGGTC AGCGGTCGCC TCGACGTGCG CAACCTGAGT
TTCACCTACC CGGGCACCGA GCGTCAGGTA CTCGACGACA TCAGTTTCTC GGTCGAGCCG
GGGCAGATGG TGGCGCTGGT GGGGCGTTCT GGCAGCGGCA AGTCGACCCT GGCCAACCTG
ATTCCGCGCT TCTATCACCA CGACAAGGGC GAGATCCTGA TCGACGGCGT GGAAGTGGAG
CAATACAAGC TGCTCAACCT GCGCCGCCAC ATTGCCCAGG TGACCCAGCA CGTCACGCTG
TTCAGCGACA CCGTGGCCAA CAACATCGCT TATGGCGATC TGGCCGGGGC GCCGCGCGAA
GACATCGAGA AGGCCGCGCG TGATGCTTAT GCGATGGACT TCATCGCGCA ACTGCCTGAA
GGCCTGGACA CCCAGGTCGG CGAAAACGGC GTGCTGCTCT CCGGCGGTCA GCGCCAGCGT
CTGGCAATTG CCCGCGCCCT GCTCAAGAAC GCGCCGCTGC TGATTCTCGA CGAGGCTACC
TCGGCACTCG ACACCGAATC CGAACGGCAC ATTCAGGCCG CCCTGGATCA AGTGATGAAG
GGCCGCACCA CGCTGGTGAT CGCTCACCGG CTGTCGACCA TCGAGAAGGC CGACCTGATT
CTGGTCATGG ACCAGGGCCG GATCGTCGAG CGCGGCACCC ACGACGACTT GCTGGCACAG
AACGGCTACT ACGCGCGTCT CAATGCCATG GGCCTCGATG CCCCGGCGGA AGACATCGCC
TGA
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| Protein sequence | MTDSSPAASP SSLKIYFRLL GYVRPYISLF LISIVGFLIF ASTQPMLGYI LKYFVDGLSN
PEAVLFPTVP YLRDLQLLQA VPLLIILIAA WQGLGSYLGN YFLAKVSLGL VHDLRVQLFN
NLLVLPNRYF DKHNSGHLIS RITFNVTMVT GAATDAIKVV IREGMTVIFL FASLLFMNWK
LTLVMVAILP LIAVMVRTAS KKFRKQSKKI QLAMGDVTHV ASETIQGYRV VRSFGGEAYE
EKRFLDASQG NTDKQLRMTR TGAIYTPLLQ LVIYSAMAIL MFLVLYLRGD ASAGDMVAYI
TLAGLLPKPI RQLSEVSSTI QKGVAGAESI FEQLDVEPEV DTGTVERDSV SGRLDVRNLS
FTYPGTERQV LDDISFSVEP GQMVALVGRS GSGKSTLANL IPRFYHHDKG EILIDGVEVE
QYKLLNLRRH IAQVTQHVTL FSDTVANNIA YGDLAGAPRE DIEKAARDAY AMDFIAQLPE
GLDTQVGENG VLLSGGQRQR LAIARALLKN APLLILDEAT SALDTESERH IQAALDQVMK
GRTTLVIAHR LSTIEKADLI LVMDQGRIVE RGTHDDLLAQ NGYYARLNAM GLDAPAEDIA
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