Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0465 |
Symbol | |
ID | 3712860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 539439 |
End bp | 540473 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_346198 |
Protein GI | 77456693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTC TGATCGTTGG GCCCAGTTGG GTCGGTGACA TGGTGATGGC GCAGACACTG TTTCAGTGTC TCAAGCAGCG CCACCCGCAG TGCGAAATCG ACGTGCTGGC CCCGGAGTGG AGCCGGCCGA TCCTCGAACG CATGCCCGAA GTGCGCAAGG CCTTGAGCTT CCCGCTCGGC CACGGCGCGC TGGAGCTGGC GACCCGTCGG CGGATCGGCA AATCCCTGGC CGGCCAGTAC GACCAGGCGA TCCTGCTGCC GAATTCGTTG AAGTCGGCAC TGGTGCCGTT CTTCGCCGGC ATTCCGAAAC GCACCGGCTG GCGCGGCGAA TTCCGCTACG GCCTGCTCAA TGACGTGCGC ACGCTGGATA AAGAACGTTA TCCGCTGATG ATCGAGCGTT TCATGGCGCT GGCGTTTGAA CCGAACGCCG AACTGCCGAA ACCCTATCCG CGCCCGAGCC TGCAAATCGA CCCGGTGACC CGCGAGGCCG CATTGGCCAA GTTCGGCCTG ACCCTCGACC GTCCGGTGCT GGTGTTGTGC CCCGGCGCCG AATTCGGTGA AGCCAAGCGC TGGCCGTCTG AGCATTATGC CAAGGTCGCC GAGGCGCGCA TCCGTGAAGG CTGGCAGGTC TGGCTGTTCG GTTCGAAGAA CGATCACGCG GTCGGCGAAG ACATCCGCGC GCGGCTGATT CCGGGTCTGC GTGAAGAGTC GGTGAATCTG AGCGGCGGCA CTTCGCTGGC CGAGGCCATC GACCTGATGT CCTGCGCCGA TTCGGTCGTC TCCAACGATT CCGGCCTGAT GCACGTGGCC GCTGCGCTCA ATCGCCCGTT GGTGGCGGTC TACGGTTCGA CCTCGCCGGG TTTCACCCCG CCGCTGGCCG AACACGTGGA AATCGTCCGT CTGGGCCTCG ATTGCAGCCC TTGCTTCGAC CGCACCTGCC GTTTCGGCCA TTACAACTGC CTGCGCCAGC TGATGCCGGA CGCGGTCAAC GATGCCTTGC AGCGTTTGCA GGGCTCTGTG GTCGAGGTTC ATTAA
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Protein sequence | MNILIVGPSW VGDMVMAQTL FQCLKQRHPQ CEIDVLAPEW SRPILERMPE VRKALSFPLG HGALELATRR RIGKSLAGQY DQAILLPNSL KSALVPFFAG IPKRTGWRGE FRYGLLNDVR TLDKERYPLM IERFMALAFE PNAELPKPYP RPSLQIDPVT REAALAKFGL TLDRPVLVLC PGAEFGEAKR WPSEHYAKVA EARIREGWQV WLFGSKNDHA VGEDIRARLI PGLREESVNL SGGTSLAEAI DLMSCADSVV SNDSGLMHVA AALNRPLVAV YGSTSPGFTP PLAEHVEIVR LGLDCSPCFD RTCRFGHYNC LRQLMPDAVN DALQRLQGSV VEVH
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