| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0454 |
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| Symbol | |
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| ID | 3712849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 520721 |
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| End bp | 522736 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_346187 |
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| Protein GI | 77456682 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCGC CTGCCAATCA ACCGCGTTTC ACGTTGACCG TCGAAGGCGC CCAGTTTGAC
CTCAAAGTCC TTGAGTTCAC GGGCAAGGAA GCCATCAGCC AACCCTTTCG CTTTGACCTG
GAGCTGGTCA GTGAACGGCC GGATCTGGAT CTGGAAAGCC TGCTGCACTG TCAGGCTTTT
CTGAGTTTTG ATGAAGAAGG TTCCGGTATC CACGGTCAGA TCTATCGGGT CGGGCAGGGG
GATTCCGGCA AGCGTCTGAC CCGCTATCAC GTCAGCCTCG TTCCGCGTCT GGCCTACCTG
GGTCATCGGA TCAATCAGCG AATCTTCCAA CATCAAAGCG TGCCGCAGAT CGTGACGCAG
ATCCTCAAGG ATCACGCGAT CCTACGCGAT GCCTTCGCGT TTCGCCTCGG CAGCGATTAC
CCGCCCCGTG AATATTGTGT GCAGTACGCC GAAAGCGATT TGGCGTTCAT CCAGCGCCTG
TGTGCCGAAG TCGGTATTCA TTTTCACTTT CAGCACAGCC CGGACGGACA TCTGTTGGTG
TTCGGCGACG ATCAGACGGT ATTCCCGCGT CTGACCGAGC CGACGCTGTA CCTGCCGGGA
AGCGGCATGG CTGCATCGGC GCCGGCGATC AAGCGTTTCA CCGTACGCGT TGAGACCCGC
ACCAGCGTGG TCACCCGGCG TGATTACGAC TTCACCAAGC CCCGGCTGGC GCTGCAAAGT
CGCGCCGAAA GCGAGCAGCG CCCGGTGCTG GAGGATTACC ACTTTCCCGG CCAGTTCACC
GAGCGCGAAA CCGGCAAGCA ACTGGCCCAG CGCACCCTTG AACGACATGT CGCCGACTAC
CGTCAGGCCG AGGGCCGCAG CGATCAATCC GCTCTCGTCA GCGGACATTT CCTGCAACTG
ACCGAGCATC CGCGCCAGGA TCTGAATGAC CTCTGGCTGC TGACTGCGAT CGAGCACCGT
GGCCGACAGC CGCAAGTGCT GGAGGAATCG GTGACCAGCG ACGGTGATGA CTTCCAGGGC
TACCGAAATA CCTTTTTCGC CACGCCGTGG GACGTGTTCT TCCGCCCGCC GCTGGGCCCG
GAAAAACCAC GGATGCTCGG CTATCAACCG GCCGTGGTCA CCGGCCCGCA AGACAGTGAA
ATCCATTGCG ACGAGTACGG TCGGGTCAAG GTGCAACTGG CCTGGGATCG CGACGGTGAA
CTCAACGAGC ATTCCAGTTG CTGGCTGCGG GTCGCCAGCG GCTGGGCCCA TGATCGTTAT
GGCAGCGTGC TGATCCCCCG AGTCGGCATG GAAGTGCTGG TGGGTTTCAT CGATTCCGAC
GCCGACAAAC CGCTGGTCAT GGGTTGCCTG CCGAACGCCG CCACGCCGGT TCCGCTGGAG
CTGCCGGCCG ACAAGACCCG CAGCATTTTC CGCAGCCAGA GTAGTCCCGG CGGTGGGGGC
TACAACGAAT TGCGTATCGA AGATCGCAAA GGTGCCGAGG AAATCTACCT GCGCGCCCAG
CGAAACTGGA CCCAGCACGT ATTGAACGAT CAGCAGGTGC AGGTGGATAA CCAGCGCAGC
GTTGTCGTCA CTGGTCTCGC TAAACACGAA CTGAAGGCCG ATGAGCAGCA CATCACCCAC
GGCCAGCGCC AGACTGAAGT GAAGCAGGAC GACCACCTCA CGGTGACCGG CGACCGGCAC
ATTCGCGTGA GCAATCAGGC GATCAACGCC AGTGCTCAAT TCCACGTCAG CGCCGGCCAG
CAGGTGGTGA TCGACGGCGG GGCGAGCGCA ACGATTCAGG CGGGCGGGCA GTGGATCAAC
ATCGGCCCCG GCGGGATCTT CAGCAGCGTG CCGATTGTGG TGGGTGGTGC GCCGATGGCG
GCGATAAGTG CGGCGCCGAC GGTGCCGGGG TTGCCGGAAA AACTGGCGGC AGCCCCGGCT
GCGATTCTGA CTGCTGCGCA AATCATGAGC CTGAAAGGTG ATGCGCCTTT CTGTGAAGAA
TGCGAGCGCT GCAAAGGTGG TGTCTGTGCA GCCTGA
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| Protein sequence | MFAPANQPRF TLTVEGAQFD LKVLEFTGKE AISQPFRFDL ELVSERPDLD LESLLHCQAF
LSFDEEGSGI HGQIYRVGQG DSGKRLTRYH VSLVPRLAYL GHRINQRIFQ HQSVPQIVTQ
ILKDHAILRD AFAFRLGSDY PPREYCVQYA ESDLAFIQRL CAEVGIHFHF QHSPDGHLLV
FGDDQTVFPR LTEPTLYLPG SGMAASAPAI KRFTVRVETR TSVVTRRDYD FTKPRLALQS
RAESEQRPVL EDYHFPGQFT ERETGKQLAQ RTLERHVADY RQAEGRSDQS ALVSGHFLQL
TEHPRQDLND LWLLTAIEHR GRQPQVLEES VTSDGDDFQG YRNTFFATPW DVFFRPPLGP
EKPRMLGYQP AVVTGPQDSE IHCDEYGRVK VQLAWDRDGE LNEHSSCWLR VASGWAHDRY
GSVLIPRVGM EVLVGFIDSD ADKPLVMGCL PNAATPVPLE LPADKTRSIF RSQSSPGGGG
YNELRIEDRK GAEEIYLRAQ RNWTQHVLND QQVQVDNQRS VVVTGLAKHE LKADEQHITH
GQRQTEVKQD DHLTVTGDRH IRVSNQAINA SAQFHVSAGQ QVVIDGGASA TIQAGGQWIN
IGPGGIFSSV PIVVGGAPMA AISAAPTVPG LPEKLAAAPA AILTAAQIMS LKGDAPFCEE
CERCKGGVCA A
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