Gene Pfl01_0447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0447 
Symbol 
ID3712455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp508115 
End bp509740 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content63% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_346180 
Protein GI77456675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTC GCAATATGAA CATCGCCCCC CGGGCGTTCA CCGGTTTCGC CCTGATCGGC 
GGCCTGATGC TGATTCTCGG TGTGTTCGCC CTGAATCAGA TGAGCAAGAT CCGCGGCGCC
GCCGAGGACA TTTCCTCCAG CAGCGTGCCG AGCATCAAGA ACCTCGACGA ATTCACTCAG
CTGACCCTGC GCCTGCGGGT GCTGTCGTAC CGATTGCTGG TGAACCGCGA GCCGGACGTC
CAGCAGAAAA CCATGGATCT GCTCGATATG CGCAACCAGC AGATCCGCAA GGCCCAGACC
GATTACGAGC CGTTGATCGG CAGCCCCGAA GAGCGTGCGG CCTACGACCA GTACGTGCAG
TTGCTGGGTC AGTACCGCCA GATCGAAGAC CGGATGAAAA CCCTGTCGCG CAACAATCAG
GTGGATGAGC TGCGCAACCT GCTGAACACC CAGTTGCTCG ACAACTCCGA AGCGATCAAC
ACCGTGCTCA ACCGCCTGAT GCAGATCAAC GGCCAGCAGA TCAGCGAAAC CAACCAGCAG
GCCGCCGACC AGTATTCCTC GGCCTTCAAT CTGGTGGTGA CCCTGCTGGT GATCGCCACC
GGTCTGACCT TCCTGTTCGC CTGGTTGCTG ACCGTCAGCA TCACCAAGCC GATCGCCAAG
GCTCTGGATG CAGCGGAAAC CATCGCCGAA GGCAATCTGA CCCAACCGAT CCAAGTGGAC
GGCACCGACG AAGCCGGGCG CCTGCTGGCG GCCATGGCCA AGATGCAGTC GAAGCTGCGC
GACACCCTGC AGCGGATTTC CGGCTCGGCC ACCCAACTGG CCTCCGCCGC CGAAGAGCTG
AACAGCGTCA CCGACGAAAG CGCCCGAGGC CTGACCCAGC AGAACAACGA AATCGAGCAG
GCCGCCACCG CCGTCAACGA AATGACCAGC GCCGTGGAAG AAGTTGCGCG CAACGCGGTC
AGCACCTCGG AAGCCTCGAA GAACGCCACC ACCTCCGCCG GCGACGGCCG CGATCTGGTG
CAGGAAACCG TCAGCGCCAT CGAACGCATG AGCGCCGACG TGCAGAGCAC CGCCACCCTG
ATCGGTGATC TGGCCAACGA ATCCCGCGAC ATCGGCAAGG TGCTGGACGT GATCCGTGGC
CTGGCCGACC AGACCAACCT GCTGGCGCTC AACGCTGCAA TTGAGGCGGC CCGCGCCGGT
GAAGCCGGTC GTGGATTTGC GGTGGTCGCC GACGAAGTTC GCGCCCTGGC GCACCGCACC
CAGCAGTCGA CCAGCGAAAT CGAGCGCATG ATTGGCAGCA TCCAGAGCGG CACCGAACAC
GCCGTGGATT CGATGCGCAA CAGCACCGAG CGCGCCGAAT CGACCCTGAA CATCGCCCGT
GGTGCCGGCC TGTCGCTGGA CACGATCAAC ACGGCCATCG TTGAAATCAA CGAGCGCAAC
CTGGTGATCG CCAGCGCCGC CGAAGAGCAG GCGCAGGTGG CGCGGGAAGT GGATCGCAAC
CTGGTGAACA TCCGCGATCT GTCGGTGCAA TCGGCGACCG GGGCGAATCA GACCAGTGCG
GCGAGTAATG AGCTGTCGCG ATTGGCGCTG GATCTGAACA ATATGGTTGG GCGGTTTAGC
CTGTAA
 
Protein sequence
MSLRNMNIAP RAFTGFALIG GLMLILGVFA LNQMSKIRGA AEDISSSSVP SIKNLDEFTQ 
LTLRLRVLSY RLLVNREPDV QQKTMDLLDM RNQQIRKAQT DYEPLIGSPE ERAAYDQYVQ
LLGQYRQIED RMKTLSRNNQ VDELRNLLNT QLLDNSEAIN TVLNRLMQIN GQQISETNQQ
AADQYSSAFN LVVTLLVIAT GLTFLFAWLL TVSITKPIAK ALDAAETIAE GNLTQPIQVD
GTDEAGRLLA AMAKMQSKLR DTLQRISGSA TQLASAAEEL NSVTDESARG LTQQNNEIEQ
AATAVNEMTS AVEEVARNAV STSEASKNAT TSAGDGRDLV QETVSAIERM SADVQSTATL
IGDLANESRD IGKVLDVIRG LADQTNLLAL NAAIEAARAG EAGRGFAVVA DEVRALAHRT
QQSTSEIERM IGSIQSGTEH AVDSMRNSTE RAESTLNIAR GAGLSLDTIN TAIVEINERN
LVIASAAEEQ AQVAREVDRN LVNIRDLSVQ SATGANQTSA ASNELSRLAL DLNNMVGRFS
L