Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0415 |
Symbol | hemE |
ID | 3712462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 476414 |
End bp | 477481 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_346148 |
Protein GI | 77456643 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.218372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCCC TGAAGAACGA CCGTTTCCTC CGCGCCCTGC TCAAGCAACC CGTAGACGTC ACCCCAGTGT GGATGATGCG CCAGGCCGGC CGCTACCTGC CGGAATACCG CGCCAGCCGC GCCCAGGCCG GTGATTTCAT GAGCCTGTGC ATGAATCCGG AATTCGCCTG CGAAGTCACG CTGCAACCGC TGGACCGCTA TCCGCAACTG GACGCGGCGA TCCTGTTCTC CGACATCCTC ACCATTCCCG ATGCCATGGG CCAGGGCCTG TACTTCGAGA CCGGTGAAGG TCCGCGCTTC AAGAAAGTCG TCAGCACCCT GGCCGACATC GAAGCCCTGC CGATCCCGGA TCCGCACAAA GACCTCGGTT ACGTGATGGA CGCCGTCAGC ACCATCCGCC GCGAACTGAA TGGCCGTGTA CCGCTGATCG GTTTCTCCGG CAGCCCTTGG ACTCTCGCCA CGTACATGGT CGAAGGCGGT TCGTCGAAAG ACTTCCGCAA GACCAAGGCG ATGCTCTACG ACAACCCACA AGCCATGCAC CTGCTGCTGG ACAAACTGGC GCAGTCGGTG ACTTCGTACC TGAACGGCCA GATCCAGGCC GGTGCGCAAG CGGTGCAGAT CTTCGATACC TGGGGCGGCA ACCTGTCGGC GGCGGCATAT CAGGAATTCT CACTGGCCTA CATGAAGAAA ATCGTCAGCG GCCTGATCCG CGAGCACGAC GGTCGCAAGG TGCCGGTGAT CCTGTTCACC AAGAACGGCG GCCTGTGGCT GGAAAGCATC GCCGAGGCTG GTGCCGACGC ACTGGGCCTG GACTGGACCT GCGACATTGG CAACGCCCGC GCTCGCGTTG GCGACAAGGT GGCACTGCAA GGCAACATGG ACCCGACCGT GCTCTACGCC AAGCCGGAAG CGATCCGCAC CGAAGTCGGG CGCATCCTCG CCAGCTACGG CAAAGGCAGC GGCCACGTGT TCAACCTCGG CCACGGCATC ACGCCGGAAG TCGATCCGGA ACACGCTGGC GCGTTCCTGC GCGCGGTGCA CGAGTTGTCG GCGCAGTATC ACGAGTGA
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Protein sequence | MTALKNDRFL RALLKQPVDV TPVWMMRQAG RYLPEYRASR AQAGDFMSLC MNPEFACEVT LQPLDRYPQL DAAILFSDIL TIPDAMGQGL YFETGEGPRF KKVVSTLADI EALPIPDPHK DLGYVMDAVS TIRRELNGRV PLIGFSGSPW TLATYMVEGG SSKDFRKTKA MLYDNPQAMH LLLDKLAQSV TSYLNGQIQA GAQAVQIFDT WGGNLSAAAY QEFSLAYMKK IVSGLIREHD GRKVPVILFT KNGGLWLESI AEAGADALGL DWTCDIGNAR ARVGDKVALQ GNMDPTVLYA KPEAIRTEVG RILASYGKGS GHVFNLGHGI TPEVDPEHAG AFLRAVHELS AQYHE
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