| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0401 |
|---|
| Symbol | rpmE |
|---|
| ID | 3712487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 456326 |
|---|
| End bp | 456544 |
|---|
| Gene Length | 219 bp |
|---|
| Protein Length | 72 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | 50S ribosomal protein L31 |
|---|
| Protein accession | YP_346134 |
|---|
| Protein GI | 77456629 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.584711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCG ATATCCACCC GAATTACCCA GAAGTTGCAG TAACTTGCAG CTGCGGCAAC
AAGTTCGAAA CCCGTTCGAC CTTCGGCAAA GCCCTGGCGA TCGACGTTTG CAACGAGTGC
CACCCGTTCT ACACCGGTAA GCAGAAGACT CTGGACACCG GTGGTCGCGT TCAGAAGTTC
GCCGACCGTT TCGGTGCTTT CGGCGCGAAA AAGGCCTAA
|
|---|
| Protein sequence | MKADIHPNYP EVAVTCSCGN KFETRSTFGK ALAIDVCNEC HPFYTGKQKT LDTGGRVQKF
ADRFGAFGAK KA
|
|---|
| |