Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0385 |
Symbol | |
ID | 3712648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 438453 |
End bp | 440057 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | 2-octaprenylphenol hydroxylase |
Protein accession | YP_346118 |
Protein GI | 77456613 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.312761 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.126935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCTGC TCGCCGTCCG CCGTCTGTTG CGCATCCAGC GCGTCGTGAT CCGCTACCGC CTCGATGACC TGCTGTTCGA TCTGCCTTTG CCGTGGTTCC TGCTGGCGTT GCGCTACGTC CTGCCGTGGC GCTGGTTTCC GCGCAAGCCG CTGGAGCTCA GTCGTGGGGC ACGCCTGCGC CTGGCGCTGC AGGACCTGGG ACCGATCTTC ATCAAGTTCG GGCAGATCCT TTCGACCCGC CGCGACCTGC TGCCGGAAGA CATCGCCGAT GAGCTGATGC GGTTGCAGGA CCGCGTGCCG CCGTTCGATT CGCAGCTGTC GGTCAAGCTG ATCGAAGAGC AACTGGGCAA GAAGATCAGC GAAGTGTTCA GTCGCTTCGA CGTCGAACCG CTGGCCTCGG CCTCGGTGGC GCAGGTACAC GCCGCGCAAC TGAAGACCGG CGAAGAAGTG GTGGTCAAGG TGATCCGCCC GGGCCTGAAA CCGATCATCG CGCAGGATCT GGCGTGGCTG TTCATCCTCG CCCGCGCTGC CGAAAAGGTC TCGGCCGACG CCCGCCTGCT GCACCCGGTG GACGTGGTCA GCGACTACGA AAAAACCATC TACGACGAAC TCGACCTGTT GCGCGAGGCA GCCAACGCCA GCCAGTTGAA GCGCAACTTC GAAGGCTCGC CGCTGCTGTA TGTGCCGCAA GTCTATTGGG ACTGGTGCCG GCCGAAAGTG CTGGTGATGG AGCGCATCTA CGGGATTCAG GTGACGGATC TGGCGACCCT CGCCGACCAG CGCACCGACA TGAAAATGCT CGCCGAGCGC GGCGTGGAGA TCTTCTTCAC CCAGGTGTTC CGCGACAGTT TCTTCCACGC CGACATGCAC CCGGGCAACA TCTTCGTCAG CACCGTCAAT CCGTGGAGCC CGCAGTACAT CGCGATCGAC TGCGGCATCG TCGGCAGCCT GACCCCGGAA GACCAGGACT ATCTGGCGCG CAACCTGTTC GCCTTCTTCA AGCGCGACTA CCGCCGCGTG GCGCAATTGC ACATCGATTC GGGCTGGGTG CCGGCGGAAA CCAAGCTCAA CGAATTCGAA GCGGCGATCC GTACCGTGTG CGAGCCGATC TTCGAAAAAC CATTAAAAGA TATTTCATTT GGCCAGGTGC TGATGCGCCT GTTCCAGACC GCGCGCCGCT TCAACATGGA AGTGCAGCCG CAACTCGTAT TGCTGCAAAA GACCCTGCTG AATATCGAAG GCCTGGGCCG TCAGCTGTAC CCGGACCTCG ATCTGTGGAA CACCGCGCAG CCGTTCCTCG AACGCTGGAT GCGCGAGCGC GTCAGCCCGA AAGCCTTGCT CGGCAACGTC CAGAGCCAGT TCGAACAACT GCCGCACCTG GCCAACATGG CTCGCGACCT GCTCGAACGC ATGTCCCAGC CCCACGCCAA CGACCCGCCA CCGCCGTGGA AAAAACGCAA GGACGACTGG TTCCTGCGCC TGCTCGGCAG CGCCCATCTG GCGGGCGGTA CGATCCTCGC CGCCGGGGGC CCGTTGCACG AACTGGGGCA TTGGCCCGCC GGGATCATGG TGGCAGTCGG CTTGTATCTG GTCGTTCGCC GATAG
|
Protein sequence | MKLLAVRRLL RIQRVVIRYR LDDLLFDLPL PWFLLALRYV LPWRWFPRKP LELSRGARLR LALQDLGPIF IKFGQILSTR RDLLPEDIAD ELMRLQDRVP PFDSQLSVKL IEEQLGKKIS EVFSRFDVEP LASASVAQVH AAQLKTGEEV VVKVIRPGLK PIIAQDLAWL FILARAAEKV SADARLLHPV DVVSDYEKTI YDELDLLREA ANASQLKRNF EGSPLLYVPQ VYWDWCRPKV LVMERIYGIQ VTDLATLADQ RTDMKMLAER GVEIFFTQVF RDSFFHADMH PGNIFVSTVN PWSPQYIAID CGIVGSLTPE DQDYLARNLF AFFKRDYRRV AQLHIDSGWV PAETKLNEFE AAIRTVCEPI FEKPLKDISF GQVLMRLFQT ARRFNMEVQP QLVLLQKTLL NIEGLGRQLY PDLDLWNTAQ PFLERWMRER VSPKALLGNV QSQFEQLPHL ANMARDLLER MSQPHANDPP PPWKKRKDDW FLRLLGSAHL AGGTILAAGG PLHELGHWPA GIMVAVGLYL VVRR
|
| |