Gene Pfl01_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0376 
Symbol 
ID3712639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp431365 
End bp432324 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content63% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_346109 
Protein GI77456604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.45598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA AAAAAGCCCA ATGGCCCTGG CACGTCCTGA CCGTGCTGGT GCTGGTCGGC 
CTGGCCGGCG CGCTGTATTA CGCCACGTCG CTGATGTCCT ACGAATGGCG CTGGAACCGC
GTGCCGCAGT ACTTCGCCTA TCAGGCCGAG GAAACCCAGC GCGCGACCGA CATTTCCACC
GTCAGCGAAC TGGTGCGCAA AGGTGGCAGC GCGCAGGTCA CCCTGCGCAA CGATGCCGGT
GACGAGCAGC ACCTGACCGT CGACGAAAAC AGCCTGCAAT TCGCTCAGGG CGACGATGTG
GCCGAAGGCG ACGTCGTGGG CGTGACCCGG CATTGGGCGG CGGGCCCGCT GTTGTGGGGC
CTGTGGACCA CGCTTTGGCT GTCGGTGGTG TCCGGCGTGC TGGGCTTGCT CATCGGTCTG
GCCACCGGGC TGTGCCGGCT GTCGAGCAAC CCGACCCTGC GCGACCTGTC GACGATCTAT
GTCGAACTGG TGCGCGGCAC GCCGCTGCTG GTGCAGATCT TCATTTTCTA TTTCTTCATC
GGCACGGTGA TGAACCTGTC CCGGGAGTTC GCCGGGATCG CCGCGCTGTC GCTGTTCACC
GGTGCCTACG TGGCGGAAAT CATCCGTTCC GGTGTGCAGT CGATTGCCCG TGGCCAGAAC
GAAGCGGCGC GTTCGCTGGG TCTGAGTGCC GGCCAGTCGA TGCGTCATGT GGTGCTGCCG
CAGGCGTTCA AGCGCGTGCT GCCACCGCTG GCCGGGCAGT TCATCAGTCT GGTCAAAGAC
ACTTCGCTGG TGTCGGTGAT CGCCATCACT GAGCTGCTGA AAAGCGGCCG TGAAGTCATC
ACCACGTCGT TCTCGCCGTT CGAGATCCTG TTCTGCGTCG CCGGCCTGTA CCTGTTGATC
AACCTGCCGC TGTCGAAAAT CGCCAGCCGG CTTGAGCGGA GGCTCGCGCA AAGTGATTGA
 
Protein sequence
MKQKKAQWPW HVLTVLVLVG LAGALYYATS LMSYEWRWNR VPQYFAYQAE ETQRATDIST 
VSELVRKGGS AQVTLRNDAG DEQHLTVDEN SLQFAQGDDV AEGDVVGVTR HWAAGPLLWG
LWTTLWLSVV SGVLGLLIGL ATGLCRLSSN PTLRDLSTIY VELVRGTPLL VQIFIFYFFI
GTVMNLSREF AGIAALSLFT GAYVAEIIRS GVQSIARGQN EAARSLGLSA GQSMRHVVLP
QAFKRVLPPL AGQFISLVKD TSLVSVIAIT ELLKSGREVI TTSFSPFEIL FCVAGLYLLI
NLPLSKIASR LERRLAQSD