Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0376 |
Symbol | |
ID | 3712639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 431365 |
End bp | 432324 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_346109 |
Protein GI | 77456604 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.45598 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGA AAAAAGCCCA ATGGCCCTGG CACGTCCTGA CCGTGCTGGT GCTGGTCGGC CTGGCCGGCG CGCTGTATTA CGCCACGTCG CTGATGTCCT ACGAATGGCG CTGGAACCGC GTGCCGCAGT ACTTCGCCTA TCAGGCCGAG GAAACCCAGC GCGCGACCGA CATTTCCACC GTCAGCGAAC TGGTGCGCAA AGGTGGCAGC GCGCAGGTCA CCCTGCGCAA CGATGCCGGT GACGAGCAGC ACCTGACCGT CGACGAAAAC AGCCTGCAAT TCGCTCAGGG CGACGATGTG GCCGAAGGCG ACGTCGTGGG CGTGACCCGG CATTGGGCGG CGGGCCCGCT GTTGTGGGGC CTGTGGACCA CGCTTTGGCT GTCGGTGGTG TCCGGCGTGC TGGGCTTGCT CATCGGTCTG GCCACCGGGC TGTGCCGGCT GTCGAGCAAC CCGACCCTGC GCGACCTGTC GACGATCTAT GTCGAACTGG TGCGCGGCAC GCCGCTGCTG GTGCAGATCT TCATTTTCTA TTTCTTCATC GGCACGGTGA TGAACCTGTC CCGGGAGTTC GCCGGGATCG CCGCGCTGTC GCTGTTCACC GGTGCCTACG TGGCGGAAAT CATCCGTTCC GGTGTGCAGT CGATTGCCCG TGGCCAGAAC GAAGCGGCGC GTTCGCTGGG TCTGAGTGCC GGCCAGTCGA TGCGTCATGT GGTGCTGCCG CAGGCGTTCA AGCGCGTGCT GCCACCGCTG GCCGGGCAGT TCATCAGTCT GGTCAAAGAC ACTTCGCTGG TGTCGGTGAT CGCCATCACT GAGCTGCTGA AAAGCGGCCG TGAAGTCATC ACCACGTCGT TCTCGCCGTT CGAGATCCTG TTCTGCGTCG CCGGCCTGTA CCTGTTGATC AACCTGCCGC TGTCGAAAAT CGCCAGCCGG CTTGAGCGGA GGCTCGCGCA AAGTGATTGA
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Protein sequence | MKQKKAQWPW HVLTVLVLVG LAGALYYATS LMSYEWRWNR VPQYFAYQAE ETQRATDIST VSELVRKGGS AQVTLRNDAG DEQHLTVDEN SLQFAQGDDV AEGDVVGVTR HWAAGPLLWG LWTTLWLSVV SGVLGLLIGL ATGLCRLSSN PTLRDLSTIY VELVRGTPLL VQIFIFYFFI GTVMNLSREF AGIAALSLFT GAYVAEIIRS GVQSIARGQN EAARSLGLSA GQSMRHVVLP QAFKRVLPPL AGQFISLVKD TSLVSVIAIT ELLKSGREVI TTSFSPFEIL FCVAGLYLLI NLPLSKIASR LERRLAQSD
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