Gene Pfl01_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0340 
Symbol 
ID3713368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp384200 
End bp385285 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content63% 
IMG OID 
ProductSignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_346073 
Protein GI77456568 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA GTGACGCACT GCATCGCTTG CTACTCGACA ACCTGACCAC CGCCACCATC 
CTGCTCGACA GCGAATTGCG CCTCGAGTAC ATGAACCCGG CGGCGGAGAT GCTGCTGGCC
ATCAGCGGTC AGCGCAGCCA TGGGCAGTTC ATCAGCGAGC TGTTCACCGA GTCCACCGAG
GCGCTCAACT CGCTGCGCCA GGCGGTGGAG CAGGCGCACC CGTTCACCAA GCGCGAAGCG
ATGCTCACCG CCCTCACCGG CCAGACCCTG ACCGTGGATT ACGCGGTGAC GCCGATCCTC
AGCAACGGCG CGACCCTGCT CCTGCTGGAA GTCCATCCCC GTGACCGCCT GCTGCGGATC
ACCAAGGAAG AGGCGCAACT GTCGAAACAG GAAACCAGCA AGATGCTGGT GCGCGGCCTG
GCCCACGAGA TCAAGAATCC GCTGGGCGGC ATCCGTGGTG CCGCGCAGTT GCTGGCCCGG
GAACTGCCGG AAGACAGCCT GCGCGACTAC ACCAACGTGA TCATCGAAGA GGCCGACCGC
CTGCGCAATC TGGTCGACCG CATGCTCGGC TCGAACAAAT TGCCGTCGCT GGCCCTGTGC
AACGTACACG AAGTGCTGGA GCGGGTCTGC CAACTGGTCG AGGCCGAAAG CCAGGGCTGC
ATCACGCTGG TGCGCGATTA CGACCCGAGC ATTCCAGACG TCCTGATCGA CCGGGAACAA
ATGATTCAGG CGGTGCTGAA CATCGTGCGC AACGCGATGC AGGCCATCAG CAGCCAGAAC
GAACTGCGCC TGGGCCGCAT CAGCCTGCGC ACCCGCGCCA TGCGCCAGTT CACCATCGGC
CACGTCCGCC ATCGCCTGGT GACCAAGATC GAGATCATCG ACAACGGCCC GGGCATTCCT
GCGGAACTCC AGGAAACCAT CTTCTTTCCC ATGGTCAGCG GCCGTCCGGA CGGTACCGGG
CTGGGCCTGG CCATCACCCA GAACATCATC AGCCAGCACC AGGGCCTGAT CGAGTGTGAC
AGCCATCCAG GCCACACCAC GTTCTCGATC TTTCTGCCAC TGGAACAAGG AGCCACATCG
ACATGA
 
Protein sequence
MTISDALHRL LLDNLTTATI LLDSELRLEY MNPAAEMLLA ISGQRSHGQF ISELFTESTE 
ALNSLRQAVE QAHPFTKREA MLTALTGQTL TVDYAVTPIL SNGATLLLLE VHPRDRLLRI
TKEEAQLSKQ ETSKMLVRGL AHEIKNPLGG IRGAAQLLAR ELPEDSLRDY TNVIIEEADR
LRNLVDRMLG SNKLPSLALC NVHEVLERVC QLVEAESQGC ITLVRDYDPS IPDVLIDREQ
MIQAVLNIVR NAMQAISSQN ELRLGRISLR TRAMRQFTIG HVRHRLVTKI EIIDNGPGIP
AELQETIFFP MVSGRPDGTG LGLAITQNII SQHQGLIECD SHPGHTTFSI FLPLEQGATS
T