Gene Pfl01_0336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0336 
Symbol 
ID3713364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp380911 
End bp381396 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID 
Productpreprotein translocase subunit SecB 
Protein accessionYP_346069 
Protein GI77456564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.523386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.6169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACC AACAGAACAC TGCAGCCAGC GAAGAAGAAA CCGCACCGCA ATTCTCCTTG 
CAGCGCATCT ACGTACGCGA CCTGTCCTTC GAAGCCCCGA AAAGCCCGGC AATCTTCCGC
CAGCAGTGGG ATCCGGCGGT CGCTCTGGAT CTGAACACCC GCCAGAAAGC CCTGGAAGGT
GATTTCTACG AAGTCGTGCT GACCCTGTCC GTCACCGTGA AAAACGGTGA AGAAGTGGCC
TTCATCGCTG AAGTGCAACA GGCCGGTATC TTCCTGATCA AGAACCTGGA CGCGGCTTCC
ATGAGCCACA CCCTGGGTGC GTTCTGCCCG AACATCCTGT TCCCGTACGC TCGCGAAACC
CTGGACAGCC TGGTGACCCG CGGTTCGTTC CCGGCCCTGA TGCTGGCCCC GGTGAACTTC
GACGCCCTGT ACGCGCAAGA GCTGCAGCGC ATGCAGGAAT CCGGCGAGAC CCCAACCGTT
CAGTAA
 
Protein sequence
MTDQQNTAAS EEETAPQFSL QRIYVRDLSF EAPKSPAIFR QQWDPAVALD LNTRQKALEG 
DFYEVVLTLS VTVKNGEEVA FIAEVQQAGI FLIKNLDAAS MSHTLGAFCP NILFPYARET
LDSLVTRGSF PALMLAPVNF DALYAQELQR MQESGETPTV Q