Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0321 |
Symbol | |
ID | 3713349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 365112 |
End bp | 367334 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | AsmA |
Protein accession | YP_346054 |
Protein GI | 77456549 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.188121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGT TCGGCAAAAT CCTGGGTCTG GTACTTCTCG GGCTGTTGCT GATCATTGTG GCGGCGGGCT TCGCCCTGAC CCACCTGTTT GATCCCAACG ACTACAAAGA CGAGATCCGC CAGATTGCCC GCGACAAGGC CCACATCGAG CTGACGCTCA ATGGCGACAT CGGCTGGAGC CTGTTCCCGT GGCTCGGCCT GGAACTGCAC GAGGCCAGCG TCGCGACCCT GGCCAAACCT GCCGAACCGT TCGCCGACCT GCAGATGCTC GGCCTGTCCG TGCGCGTGCT GCCGCTGCTG CGCCGCGAAG TGCAGATGAG CGACGTGCGT GTCGAAGGCC TGAACCTGCG TCTGAACCGT GACAAGAATG GTCACGGTAA CTGGGAAGAC ATCGGCAAGG TGCCGGCTCC CGCCGGCAGC ACACCGCCTG CGACCGCTGG GGAAGCCTCT CCAGCAACAC CGGCCCCGGT GGAAAAACCG GCCCAGCCGA TCCGCCTCGA CATCGACAGC CTGACCGTCA ACAACGCCCG TGTGGAATAC AACGACGAGC TGACCGGCAA GCAATTCAGC GCCGAAAGCA TCCAGTTGAG CACCGGCGCG GTTCACGATT CAACCAACAT CCCGGTCAAG GCCACCGCGT TCCTCGGCAC CAACCAGCCA GTGCTGCGGG TGCGCACCGA GCTCAACGGC GAGCTGCGCT TCGAGCGCGC CCTGCAACGC TACAAGTTCG AAGACCTGAA GCTGTCCGGC GAAGTCGCCG GCGATCCGCT GCAAGGCAAG ACCGTGACCT TTGCCGCCCA GGGCCAACTG TTGCTGGACA AGGCCGCCAA CGTCGCCGAA TGGACCGGCA TCAAACTGTC GGTCAATCAG TTGCGTGCCC TCGGCGAGCT GAAGGCCAAC GACCTGGACA AGACCCCACA GATCAGCGGC GGGATTTCCA TCGCCCAGTT CGACCTGGCG AAATTCGTCG ACAGCATCGG CCAGACCCTG CCAGCCATGG CCGAAGGCAG CCTGAGCAAG GTTGAACTGG TCAGCCGTGT CGCCGCGACG CCGACCAGCC TGGCGCTGGA CAACATCAAC CTGAAACTCG ACGACAGCAG TTTCAGTGGC CGCATCGCCG TCGAGGATTT CGCCAAACAA TCGCTGCGGG CGGTCCTCAA GGCCGACACC TTCAACGTCG ACCGCTACCT GCCGCCGAAA TCGGAAAAAG CCAATAACGC CACTCAGGTT CGTCAGGCCG AAGTCGCCAG TACCGAGGCC GATGCGATGG CGGGTGCCGG CAGCACACCG CTGCCGGAGA AACCGAGCAA AAGCGCTTGG AGCACCGAGC GCCTGTTCCC GGTCGAGCGC CTGAGCAAGC TCGACGTGAA CGCTGACCTG ACCTTCGGCC AGTTGACCCT CGACAAATTG CCGATCCAGA ACGCCGCACT GAAAGCGACC GGCCAGGGCG GCCTGCTGAC TCTGGAGAAC CTGCGCGGCG AGCTGTACAA CGGCGACTTC GAAGCCAAGG GCACACTGGA CGTGCGCCAG AACGCGCCGG TGCTGAACCT GCAAACCCGG ATCAACCGCG TGCCAGTGGA GAAAATCCTC GAAAGCCAGG GCAAGAACCC GCCGGTCAAG GGTCTGGTCA ATCTCACCAG CACCGTCACC GGCAGCGGCA ACAGCCAGCA GGCGCTGATC GAAACCCTCA ACGGCAACGC CAGTTTCGTG ATCAACAACG GCGTGCTGCT CAACGCCAAC CTTGAGCAGC AACTGTGCAA GGGCATCGCC ACCCTCAACC GTAAATCCCT GAGCGGCGAG CCGCGCGGCA AGGACACACC GTTCCAGGAG CTCAAGGGCA ACCTGACCTT CCGCAACGGC TTGGCCAGCA ACCCGGATCT GAAAGTGCGC ATCCCCGGCA TGAGCGTCAA CGGTGACGGC GATATCGACC TTAGGGTGCT GGGCATGGAC TACCGCGTCG GCATCATCGT CGAAGGCGAC ACCAGCGCCA TGCCGGATCC GGCCTGCCAG GTCGGCGACA AATTCGTCGG CATCGAATGG CCGCTGCGTT GCCGTGGCCC ACTGGAACTG GGCGCCAAGG CCTGCCGCGT GGACAACGAA CGCATGGGCC AGGTCGCGAG CAAACTGGCC GGCGACAAGC TCAGCGAAAA AATCGACGAA AAACTGGGTG ATAAAGTCAG CCCGGAACTG AAAAACGCAT TGAAGGGGCT GTTCAAGCGA TGA
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Protein sequence | MKAFGKILGL VLLGLLLIIV AAGFALTHLF DPNDYKDEIR QIARDKAHIE LTLNGDIGWS LFPWLGLELH EASVATLAKP AEPFADLQML GLSVRVLPLL RREVQMSDVR VEGLNLRLNR DKNGHGNWED IGKVPAPAGS TPPATAGEAS PATPAPVEKP AQPIRLDIDS LTVNNARVEY NDELTGKQFS AESIQLSTGA VHDSTNIPVK ATAFLGTNQP VLRVRTELNG ELRFERALQR YKFEDLKLSG EVAGDPLQGK TVTFAAQGQL LLDKAANVAE WTGIKLSVNQ LRALGELKAN DLDKTPQISG GISIAQFDLA KFVDSIGQTL PAMAEGSLSK VELVSRVAAT PTSLALDNIN LKLDDSSFSG RIAVEDFAKQ SLRAVLKADT FNVDRYLPPK SEKANNATQV RQAEVASTEA DAMAGAGSTP LPEKPSKSAW STERLFPVER LSKLDVNADL TFGQLTLDKL PIQNAALKAT GQGGLLTLEN LRGELYNGDF EAKGTLDVRQ NAPVLNLQTR INRVPVEKIL ESQGKNPPVK GLVNLTSTVT GSGNSQQALI ETLNGNASFV INNGVLLNAN LEQQLCKGIA TLNRKSLSGE PRGKDTPFQE LKGNLTFRNG LASNPDLKVR IPGMSVNGDG DIDLRVLGMD YRVGIIVEGD TSAMPDPACQ VGDKFVGIEW PLRCRGPLEL GAKACRVDNE RMGQVASKLA GDKLSEKIDE KLGDKVSPEL KNALKGLFKR
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