| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0187 |
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| Symbol | gabD |
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| ID | 3717538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 225316 |
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| End bp | 226758 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | succinate-semialdehyde dehydrogenase I |
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| Protein accession | YP_345920 |
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| Protein GI | 77456415 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTTA AAGACACCCA GTTGTTCCGC CAGCAAGCCT TCATCGATGG CGCATGGGTC
GACGCGGACA ACGGTCAGAC GATCAAGGTC AACAACCCGG CCACTGGCGA GATTCTGGGC
ACCGTGCCGA AGATGGGCGC TGCCGAAACC CGCCGCGCCA TCGAAGCCGC CGACAAGGCG
CTTCCGGCCT GGCGTGCACT GACCGCCAAG GAGCGTGCAG GCAAACTGCG TCGCTGGTTC
GAACTGATGA TCGAGAACCA GGACGACCTC GCTCGCCTGA TGACCCTCGA GCAAGGCAAA
CCACTGGCCG AAGCCAAGGG CGAAATCGTT TACGCCGCTT CGTTCATCGA GTGGTTCGCC
GAAGAAGCCA AGCGCATCTA CGGTGACGTG ATTCCGGGCC ACCAGCCGGA CAAGCGCCTG
ATCGTGATCA AGCAACCGAT CGGCGTTACC GCTGCCATCA CCCCGTGGAA CTTCCCGGCG
GCGATGATCA CTCGTAAAGC GGGCCCGGCC CTGGCCGCCG GTTGCACCAT GGTGCTCAAG
CCTGCTTCGC AAACCCCGTT CTCTGCATTT GCCCTGGCCG AACTGGCCCA GCGCGCCGGC
ATCCCCAAAG GTGTGTTCAG CGTGGTGTCC GGCAGCGCCG GCGACATCGG CAGCGAGCTG
ACCAGCAACC CGATCGTGCG CAAACTGTCC TTCACCGGTT CGACCGAAAT CGGTCGTCAG
CTGATGTCGG AATGCGCCAA GGACATCAAG AAAGTCTCCC TGGAACTGGG CGGCAACGCG
CCATTCATCG TGTTCGACGA CGCGGACCTG GATAAGGCCG TCGAAGGCGC GATCATTTCC
AAGTACCGCA ACAACGGCCA GACCTGCGTC TGCGCCAACC GTCTGTACAT TCAGGATTCG
GTTTACGACG CGTTCGCCGA GAAGCTGAAA GTGGCAGTCG CCAAGCTGAA GATCGGCAAC
GGTCTGGAAG AAGGCACCAC CACGGGTCCG CTGATCGACG AGAAAGCCGT GGCCAAGGTG
CAAGAGCATA TCGCTGACGC GGTGAGCAAA GGCGCGACCG TTCTGGCCGG CGGCAAGCCG
ATGGAAGGCA ACTTCTTCGA GCCGACCATC CTGACCAACG TGCCGAAAGA CGCTGCCGTG
GCCAAGGAAG AAACCTTCGG TCCGCTGGCG CCGCTGTTCC GCTTCAAAGA CGAAGCCGAC
GTGATCGCGA TGTCGAACGA CACCGAGTTC GGTCTGGCCT CGTACTTCTA CGCTCGCGAC
CTGGGCCGTG TGTTCCGTGT GGCGGAAGCC CTGGAGTACG GCATGGTCGG CGTCAACACC
GGGCTGATCT CCAACGAAGT CGCGCCGTTC GGCGGCATCA AGGCCTCGGG CCTGGGCCGT
GAAGGCTCCA AGTACGGCAT CGAAGATTAC CTGGAAATCA AATACCTCTG CCTGGGCATC
TAA
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| Protein sequence | MQLKDTQLFR QQAFIDGAWV DADNGQTIKV NNPATGEILG TVPKMGAAET RRAIEAADKA
LPAWRALTAK ERAGKLRRWF ELMIENQDDL ARLMTLEQGK PLAEAKGEIV YAASFIEWFA
EEAKRIYGDV IPGHQPDKRL IVIKQPIGVT AAITPWNFPA AMITRKAGPA LAAGCTMVLK
PASQTPFSAF ALAELAQRAG IPKGVFSVVS GSAGDIGSEL TSNPIVRKLS FTGSTEIGRQ
LMSECAKDIK KVSLELGGNA PFIVFDDADL DKAVEGAIIS KYRNNGQTCV CANRLYIQDS
VYDAFAEKLK VAVAKLKIGN GLEEGTTTGP LIDEKAVAKV QEHIADAVSK GATVLAGGKP
MEGNFFEPTI LTNVPKDAAV AKEETFGPLA PLFRFKDEAD VIAMSNDTEF GLASYFYARD
LGRVFRVAEA LEYGMVGVNT GLISNEVAPF GGIKASGLGR EGSKYGIEDY LEIKYLCLGI
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