| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0153 |
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| Symbol | |
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| ID | 3717503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 184462 |
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| End bp | 186531 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_345886 |
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| Protein GI | 77456381 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATG CCAATGCTCG TTTGCGCCTC AATACCGACG ACCTCGATCA CGATCTGCAG
GTGCTGTCCT TCACCGGCAC CGAATCCATC AGCCAGCCAT ATTGCTTCAA CGTCAAACTG
GTCAGCTCGA GACCGGACAT CGATCTTCCC GACCTCATGC ACCGGCAGGC CTTTCTGGCC
TTCGATGACA ACGGGCATGG CGTCCATGGA CAGATCCAGC ACATTGGCCG GGGCGATATC
GGGCACCGGT TGACCCAATA CCACCTGATC CTCGCGCCAT GCCTGGCGAA CCTGGGCCAT
CGTTTCAATC AGCGGATTTT TCAGAACCTG AGCATTGCGC AAATCATCGG GCAAATTCTT
CAGGAACATG GCATCCACGC AGATGGCTAT CTGTTTCAGA TCGGCCAGGC CCTGCCGGAT
CGCGAATATT GCGTTCAATA CAACGAGTCC GATCTGCATT TCATCCAGCG CCTGTGCCAG
GAAGACGGCC TGCACTATCA CTTTCGCCAC AGCCTCGACA GGCACCTGCT GGTATTTGGC
GATGATCAGA CCGTATTTCC CAGACTGGCC CGGCCGACAC CATTCAAAAA GCGCAACGCG
ATGGTGGCCG ACAGGCCGGT GATTCACCGT TTCGAGTGTG GGCGAAATAC CCGCACCAAT
CGCACCCGTC GGCGCGCCTA CGATTTCAAA AAGGCGCACC TCGTGCTGGA GTCCGAGGCG
CGAATACCGA ACGAACCCCG CCAGCCTGAT CTGGAGGACT ACCTGTATCC GGACCGGGTC
CTCAACCGTG AGCACGGCAA ACTGCTGACC CGGCGGGCTC TGGAACGCCA TCGCAGCGAT
GAGCTCACGG GCGAAGGCGA CAGCGACGAA CCAGCGCTGG TGTCGGGGCA TTTTCTGTCG
CTGTCAGAAC ACCCCGACCC CGCGTTAAAT GACCTCTGGC TGCTGACCGG AATCCGTCAT
GAAGGCAAGC AGCCTCAAGT ACTTGAAGAA AGCGGTAGCG ACATCGCCGT GAAGGATCAA
AGCGACTTCG TCCAGGGCTA TCGGAACCAT TTCGAAGTCA CGCCATGGGA TGCGATCTAT
CGCCCGTCAT TGCGCTACGA CAAACCTTCC ATCGGCTGTA CTCAGACTGC CGTGGTTACC
GGCCCGGAAG GCGAAGATAT CCATTGCGAC GCCTATGGCC GGGTCAAGGT GCAGTTTTTC
TGGGACCGCG AAGGCCGGCA CAACGACAAG AGCAGTTGCT GGTTGCGGAC CACCACGAAC
TGGGCCGGCA ACGCCCATGG CAGCGTGATC ATTCCGCGCG TGGGCATGGA GGTGCTGGTG
ACGTTTCTCA ACGGTGATCC CGACCATCCG GTGATCAGCG GTTGCCTGGC CAACAGCGCC
AACCCGGTGC CCTATGAATT GCCGGCGCAC AAGACCCGCA GCGTGTTCCG GTCCCGCAGC
ACGCCCGACA GCAATGGCTT CAATGAGCTG ATGATCGAAG ACCGCGCCGG TCAGGAGCTG
ATCTATCTGC GCGCCCAGCG TGATCTGCAG CAGAAGATCG AGCACGACAG TCACCTGGAG
GTCGGCAACG AACGTCGGGA AAGCATCCGT GGCAACAGCG TCAGCGTGCT GCACGCAGAA
GAACACCGCA CCCTCACCGG TCATCGCAAG ACCCATCTCA AGGCCAGCGA TCATCTGCAC
GTCAGCGACA GCAGTCACAC CCGGATCGGG CAATCACTGA CGATGGAAGT CGGGCGGCAG
CTCTGTTTCA GTGCCGGGGA TCATTTGGTG CTGGAGGCCG GAAAGAGCAT CAGCCTGAAA
GTCGGTGGCG AGCATTTCGT GCTCGATCAC GGCGGTCTTT TCGGGAGCAG CGACCTGCTG
ATCGGCGGCG TGCCCATACC GTTCCTGCGC GCCCGATTGT TGCAGCCCGA AGACATTGAA
GACTTGTCGG CGCCCGCGCC CTTGCCGCCA CTGGTGGCGC CCTCACAACA GGCATTGATG
GCCGCGAGCA AAAGCCTGGG CGCGGATTTC TGCCCGATCT GCGAAGCCTG CCGCGCGGGC
GAGTGCGCCA TTGCGGAGGC CGCTGCATGA
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| Protein sequence | MFNANARLRL NTDDLDHDLQ VLSFTGTESI SQPYCFNVKL VSSRPDIDLP DLMHRQAFLA
FDDNGHGVHG QIQHIGRGDI GHRLTQYHLI LAPCLANLGH RFNQRIFQNL SIAQIIGQIL
QEHGIHADGY LFQIGQALPD REYCVQYNES DLHFIQRLCQ EDGLHYHFRH SLDRHLLVFG
DDQTVFPRLA RPTPFKKRNA MVADRPVIHR FECGRNTRTN RTRRRAYDFK KAHLVLESEA
RIPNEPRQPD LEDYLYPDRV LNREHGKLLT RRALERHRSD ELTGEGDSDE PALVSGHFLS
LSEHPDPALN DLWLLTGIRH EGKQPQVLEE SGSDIAVKDQ SDFVQGYRNH FEVTPWDAIY
RPSLRYDKPS IGCTQTAVVT GPEGEDIHCD AYGRVKVQFF WDREGRHNDK SSCWLRTTTN
WAGNAHGSVI IPRVGMEVLV TFLNGDPDHP VISGCLANSA NPVPYELPAH KTRSVFRSRS
TPDSNGFNEL MIEDRAGQEL IYLRAQRDLQ QKIEHDSHLE VGNERRESIR GNSVSVLHAE
EHRTLTGHRK THLKASDHLH VSDSSHTRIG QSLTMEVGRQ LCFSAGDHLV LEAGKSISLK
VGGEHFVLDH GGLFGSSDLL IGGVPIPFLR ARLLQPEDIE DLSAPAPLPP LVAPSQQALM
AASKSLGADF CPICEACRAG ECAIAEAAA
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