| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0143 |
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| Symbol | |
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| ID | 3717493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 172515 |
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| End bp | 173585 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | secretion protein HlyD |
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| Protein accession | YP_345876 |
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| Protein GI | 77456371 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.723307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTC AAGCAAAGCA AAAACTCGCG GTGGCTGTGG CCGCTGCGCT GGCGGTCGGT
GTGCTGGTGT ATCTGGCGAT GCCCGGCCTG TTCGGCAAGC GCACTCAGCA GAACACCAAC
GACGCGTTCG TCTCCGCCGA TTTCACCCTG GTGGTGCCGC GTGTGGCGGG GTTCATCAAA
GAGGTGCTGG TGGAAGACAA CCAGCAGGTC AAGGCCGGGC AGTTGCTGGC GCTGATCGAT
GACCGCGACT TGCGCGCCGC TGCCGAAGCC GCCGATGCGC AAACCCTGGT CGCCCGCGCG
CAGTTGCAGA ACGCCAAGGC CACCCTTGAG CGCCAGTCCT CGGTGATCGC TCAGGCGCAG
GCGTCGGTGG TGTCGGCCAA GGCTGAAATG GCTTTCGCCC AGCAGGAATT GAACCGCTAT
AACCACTTGG CTGGCGTCGG TGCAGGCACC GTGCAGAACG CGCAACAGGC GCGCACCCGG
ATCGATCAGG CCTCTGCGCG GCTGGACACG GCCACCGCGA AACTGGCAGC GGAACGCAAG
CAGGTGGAAA TCCTCACGGC GCAGCGCGAT GCCGCCGAAG GCAGTTTGAA ACACGCGCAG
GCCGCGCTGG AAATCGCCAG TTTCGAGCTG TCCTACACGC GCATCACCGC GCCCCAGGAC
GGCATGATCG GCGAGCGTGC CGTACGGGTC GGCGCCTACG TGACACCGGG TAGCAAGCTG
CTGGCGGTGG TGCCGTTGAA GCAGGCCTAT GTGGTCGCCA ACTTCCAGGA AACCCAGCTC
ACCGACGTGC AGCCGGGGCA GGACGTTGTG GTGCGGGTCG ACAGCCTCGG CGGCGAAGCC
CTCACCGGCC GCGTCGAGAG CATTGCCCCA GCGACCGGCG TGACCTTCGC GGCGGTCAAA
CCGGACAACG CCACCGGCAA CTTCACCAAG GTTGTGCAGC GAATTCCGGT GAAGGTTCTG
CTGTATCCGG GTCAGCCGCT GGCCGAACGC TTGCGGGTCG GGATGTCGGT AGAGGCGAGC
ATTGATACCA AAAGCTCAGC GACGTCGGTG CGTGAGGTGA CGCAGCGATG A
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| Protein sequence | MTTQAKQKLA VAVAAALAVG VLVYLAMPGL FGKRTQQNTN DAFVSADFTL VVPRVAGFIK
EVLVEDNQQV KAGQLLALID DRDLRAAAEA ADAQTLVARA QLQNAKATLE RQSSVIAQAQ
ASVVSAKAEM AFAQQELNRY NHLAGVGAGT VQNAQQARTR IDQASARLDT ATAKLAAERK
QVEILTAQRD AAEGSLKHAQ AALEIASFEL SYTRITAPQD GMIGERAVRV GAYVTPGSKL
LAVVPLKQAY VVANFQETQL TDVQPGQDVV VRVDSLGGEA LTGRVESIAP ATGVTFAAVK
PDNATGNFTK VVQRIPVKVL LYPGQPLAER LRVGMSVEAS IDTKSSATSV REVTQR
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