| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0136 |
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| Symbol | |
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| ID | 3717879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 164533 |
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| End bp | 165900 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_345869 |
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| Protein GI | 77456364 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCTTA AGTCGGGTTT CAAGGATTCG ATCCGCCGCT ACTTCAAAGG CTCGGCATCG
CTGCAGGGCC AGCCGCTGCC GGAGGTCAAC AAGGCCTTGA TCGAGGACGC GCCACGCGTG
GTGCGCCTGA CGATCTGGGC GATCATCGGC TTCTTCGTGT TCCTGATGCT GTGGGCCAAC
TTCGCCGTCA TCGACGAAGT GACCAAGGGC GACGGCAAGG CGATTCCTTC GTCGAAGATC
CAGAAAATCC AGAACCTCGA GGGCGGTATC GTCTCCGAAC TGTTCGTCAA GGAAGGCCAG
ATCGTCGAGG CCGGCGCGCC GCTGGTTCGC CTGGACGACA CGCGTTTTGC GTCCAATGTC
GGCGAGACCG AAGCGGATCG CCTGTCGATG CTGCTGCGGG TCGAGCGCCT GAGCGCCGAG
GTCGATGACC GCCCGCTGAA TTTCCCCGAG GACGTGCTCA AAGCCGTGCC GGGTCAGGCC
AAGAGCGAAG AGTCGTTGTA CATCAGCCGT CGCCAGCAAC TGCACGATGA AGTTGGGGGG
TTGCAGGAGC AGTTGATCCA GCGTCAGCAA GAGCTGCGCG AATTCACCTC GAAACAGGCG
CAGTACCGCC AGCAACTCGG CCTGCAACGC CAGGAAATCA ACATGTCCGA GCCGTTGGTG
GCCCAGGGCG CGGTGTCGCC GGTGGAAGTG CTGCGACTCA AGCGTGCGGA AGTGGAAACC
CGTGGTCAGC TCGACGCCAC CACTTTGGCG ATCCCGCGCG CCGAATCGGC GATCAAGGAA
GTGCAGCGCA AGATCGACGA GACCCGCGGC AAATTCCGCA GCGAAGCCCT GACTCAGCTC
AACGAGGCGC GCACCGACCT GAACAAGGCC CAGGCCACCG GCAAGGCGCT GGAAGACCGG
GTCAGTCGGA CGCTCGTTAC TTCGCCGGTG CGGGGCATCG TCAACAAGAT GCTGGTCAAC
ACCATCGGCG GCGTGATCCA GCCGGGCAGC GACCTGTTGG AAATCGTGCC GCTGGACGAC
ACCCTGCTGG TCGAAGCGAA GATTCGCCCG CAGGACATCG CGTTCCTGCA TCCTGGCCAG
GAAGCCACGG TGAAATTCAC CGCGTATGAC TACACCATCT ACGGCGGTCT CAAAGCCAAG
CTGGAACAGA TCGGCGCCGA CACCATCACC GACGAAGACA AGAAAACCAC CTACTACGTC
ATCAAGCTGC GCACCGAGCG CAGCCATCTC GGCACCGACG AGAAGCCGTT GCTGATCATC
CCGGGGATGG TGGCGTCGGT GGACATCATC ACCGGCAAGA AGACCGTGTT GAGCTATCTG
CTCAAGCCAA TCATCCGGGC GCGCGCCGAG GCGTTGCACG AACGGTAA
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| Protein sequence | MLLKSGFKDS IRRYFKGSAS LQGQPLPEVN KALIEDAPRV VRLTIWAIIG FFVFLMLWAN
FAVIDEVTKG DGKAIPSSKI QKIQNLEGGI VSELFVKEGQ IVEAGAPLVR LDDTRFASNV
GETEADRLSM LLRVERLSAE VDDRPLNFPE DVLKAVPGQA KSEESLYISR RQQLHDEVGG
LQEQLIQRQQ ELREFTSKQA QYRQQLGLQR QEINMSEPLV AQGAVSPVEV LRLKRAEVET
RGQLDATTLA IPRAESAIKE VQRKIDETRG KFRSEALTQL NEARTDLNKA QATGKALEDR
VSRTLVTSPV RGIVNKMLVN TIGGVIQPGS DLLEIVPLDD TLLVEAKIRP QDIAFLHPGQ
EATVKFTAYD YTIYGGLKAK LEQIGADTIT DEDKKTTYYV IKLRTERSHL GTDEKPLLII
PGMVASVDII TGKKTVLSYL LKPIIRARAE ALHER
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