Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0131 |
Symbol | |
ID | 3717874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 142534 |
End bp | 144480 |
Gene Length | 1947 bp |
Protein Length | 648 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_345864 |
Protein GI | 77456359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.825955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTGT TCAAACAGCT GTTGATCGCT ATCTGTCTGT TCCTGGTGGT CGCCTTCACC GGCAGCTTCA TGGTCAGTCT GGAGAGCTCG CGCACCCAGT ACGTCAACCA GTTGCGCTCC CACGCCCAGG ATGCGGCCAC GGCGCTGGCG CTGTCGTTGA CGCCGAACAT CGATGACCCG GCGATGGTCG AGTTGCTGGT CAGTTCGATC TTCGACAGCG GTTATTACTC GAGCATCCGC GTGGTCGATC TGAAGACCGA CCAGACCATC GTCGAGCGCA ACGGCATTCC GGCGGTCACC AACGTGCCCG ACTGGTTCGT CAAACTGATC GGCCTGGAAC CGGCCGGTGG CGATGCGCTG GTCAGCCGTG GCTGGGAGCA GGCGGCACGG GTCGAGGTAG TCAGCCACCC GATGTTCGCT TTGGCCAAAC TCTGGCAGAG CGCACTGGGC AGCCTGGGCT GGTTGCTGGT CTGCGGCGCG GTGAGTGCGG TGCTGGGCGC GTTGTTGTTG CGTCGGCAAT TGAAGCCGCT CGATTACATG GTCAAGCAAT CCCACGCCAT CGCTCGTCGT GAGTTCCTGA GTCTGCCGGA CCTGCCGCGC ACGCCTGAAT TGCGCCGCGT AGTGCTGGCG ATGAACCAGA TGGTCGAGAA GCTCAAGGCA CTGTTCCAGG AGCAGGCCGA GCGCAGTGAA AAACTGCGTA CCGAGTCCTA CCAGGACAAC CTCACAGGGT TGGCCAACCG GCGTTATTTC GAGATGCAGC TGAATGCGCG GGTGAGCAAC CCGGAGCAGG CCAGTTCCGG TTATCTGCTG CTGTTGCGGG TCAAGGATCT GGCCGGGCTG AACCAGCGCC TTGGCGGTCA GCGCACCGAT GAATTGTTGA AAGCGGTCGG CGAGCAACTG TCCCGCGAGT GCGCCAAATA TCCGGAAACC CAGAACCTCG TCACCCGGAT TCGCGGTGGT GAATTCGCCG TGCTGGCGCC GGGGATGACC CGCGAAGAGG CGCTGCAACT GGCGCAGAGT CTCGACAGTG CCCTGAGCAG CCTGTACGCG ACGGGTGCCA CCGACGTGGC CGCCGTGGCT TCTATCGGCC TGGCACCGTT CGCTCACGGC GATTCGCCGC AAGCGGTCCT CAGCCTCGGC GATCAGGCGC TGGCCCAGGC CGAAGGGCAG GGCGAGCAGA ACTGGGCGTG CCTCGATCAG AGCCTGGTGG CAGACGTCGG TGACGATCAC CACGCCTGGC ATCGCCTGCT CGATCAGGCG TTGAATCAGC GGCGTTTCGA GCTGTTCTTC CAGCCGGTGG TGGCGGCGCA GGACACGCAA CTGGTGCTGC ATTACAAGGT GCTGTCGCGC TTGCTCGACG AGCAGGGTCA GACCATTCCC GCCGGGCGCT TCCTGCCCTG GCTGGAGCGC TTCGGCTGGA CCGCGCGACT GGACCGGTTG ATGCTCGAGC GGGTGCTGGA GCAGATGGCC GGACATGAAG AATCTTTGGC GCTGAACCTG TCCTCGGCGA CCCTGGCCGA TCCGCAGGCG TTGAACAAAG TGTTCGAGAT TCTGCGGGCG CATTCCAACC TCGGAGCACG CCTGACCCTG GAAATCGGCG AGGAACAATT GCCGGAGCAA GCGGTGCTGG AACAGCTGAC CCGGCGCCTG CGCGAGCTCG GTTTCTCCCT GAGCCTGCAG CGCTTCGGCG GACGCTTCAG CATGATCGGC AACCTGGCGC GGCTGGGGCT GGCGTACCTG AAGATCGATG GCAGCTACAT CCGGGCGATC GATCAGGAAA GCGACAAGCG GCTGTTCATC GAAGCGATCC AGCGTGCGGC GCACAGCATC GATCTGCCGT TGATTGCCGA ACGGGTCGAG ACGGAAGGGG AATTGTCGGT GATTCGCGAG ATGGGGTTGT ATGGGGTTCA GGGGCAGCTG TTCGGTGAGC CAAAACCCTG GGGCTGA
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Protein sequence | MSLFKQLLIA ICLFLVVAFT GSFMVSLESS RTQYVNQLRS HAQDAATALA LSLTPNIDDP AMVELLVSSI FDSGYYSSIR VVDLKTDQTI VERNGIPAVT NVPDWFVKLI GLEPAGGDAL VSRGWEQAAR VEVVSHPMFA LAKLWQSALG SLGWLLVCGA VSAVLGALLL RRQLKPLDYM VKQSHAIARR EFLSLPDLPR TPELRRVVLA MNQMVEKLKA LFQEQAERSE KLRTESYQDN LTGLANRRYF EMQLNARVSN PEQASSGYLL LLRVKDLAGL NQRLGGQRTD ELLKAVGEQL SRECAKYPET QNLVTRIRGG EFAVLAPGMT REEALQLAQS LDSALSSLYA TGATDVAAVA SIGLAPFAHG DSPQAVLSLG DQALAQAEGQ GEQNWACLDQ SLVADVGDDH HAWHRLLDQA LNQRRFELFF QPVVAAQDTQ LVLHYKVLSR LLDEQGQTIP AGRFLPWLER FGWTARLDRL MLERVLEQMA GHEESLALNL SSATLADPQA LNKVFEILRA HSNLGARLTL EIGEEQLPEQ AVLEQLTRRL RELGFSLSLQ RFGGRFSMIG NLARLGLAYL KIDGSYIRAI DQESDKRLFI EAIQRAAHSI DLPLIAERVE TEGELSVIRE MGLYGVQGQL FGEPKPWG
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