Gene Pfl01_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0103 
Symbol 
ID3717802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp105726 
End bp106958 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content63% 
IMG OID 
Producttryptophan synthase subunit beta 
Protein accessionYP_345836 
Protein GI77456331 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGA CTTCGAACAA CTCCGATCTG CGTAACGGCC CTGACGCCAA CGGCCTGTTT 
GGCTCGTTCG GCGGCCGTTA CGTTGCCGAA ACCCTGATGC CGTTGATCCT CGACCTGGCC
CGCGAATACG AAGCGGCCAA GGAAGATCCG GCGTTCAAAG AAGAATTGGC CTACTTCCAG
CGTGACTATG TCGGACGTCC GAGCCCGCTG TATTTCGCCG AGCGCCTGAC CGAGTTCTGC
GGTGGCGCCA AGATCTACCT CAAGCGCGAA GAGCTGAACC ACACCGGCGC GCACAAGATC
AACAACTGCA TCGGCCAGAT CCTGCTGGCG CGGCGCATGG GCAAAAAACG CATCATCGCC
GAGACCGGCG CCGGCATGCA CGGCGTGGCC ACCGCCACCG TGGCTGCGCG TTTCGGTCTG
GACTGCGTGA TCTACATGGG CACCACTGAC ATCGAACGCC AACAGGCCAA TGTGTTCCGC
ATGAAGCTGC TGGGCGCCGA GGTGATCCCG GTGGTCGCCG GCACCGGCAC CCTGAAAGAC
GCAATGAACG AAGCGCTGCG TGACTGGGTG ACCAATGTCG ACAGCACCTT CTACCTGATC
GGCACCGTGG CCGGTCCGCA CCCTTATCCA GCCATGGTTC GCGACTTCCA GGCGGTGATC
GGCAAGGAAA CCCGCGATCA GCTGCAAGCC CAGGAAGGCC GCCTGCCGGA CAGCCTGGTG
GCGTGCATCG GTGGCGGCTC CAATGCCATG GGCCTGTTCC ACCCGTTCCT CGACGACAAG
AGCGTTGAAA TCATCGGTGT CGAAGCCGCC GGTTACGGCA TCGAGACCGG CAAGCACGCG
GCCAGCCTCA ACGGCGGTGT ACCGGGTGTG CTGCACGGCA ACCGCACCTT CCTGCTGCAG
GACGACGATG GTCAGATCAT CGACGCCCAC TCGATTTCCG CCGGCCTCGA CTATCCGGGC
ATCGGCCCTG AGCACGCGTG GTTGCATGAC ATCGGCCGCG TCCAGTACAC CTCGGTGACC
GACGACGAAG CCCTCGCCGC ATTCCACCAG TGCTGCCGCC TGGAAGGGAT CATCCCGGCA
CTGGAAAGCG CCCACGCCCT GGCCGAAGTA TTCAAACGCG CACCGAAACT GCCGAAGGAT
CACCTGATGG TGGTCAACCT GTCCGGTCGC GGCGACAAAG ACATGCAGAC CGTCATGCAC
CACATGGAAA CTTCCAAGCA GGAGAAACAC TGA
 
Protein sequence
MTQTSNNSDL RNGPDANGLF GSFGGRYVAE TLMPLILDLA REYEAAKEDP AFKEELAYFQ 
RDYVGRPSPL YFAERLTEFC GGAKIYLKRE ELNHTGAHKI NNCIGQILLA RRMGKKRIIA
ETGAGMHGVA TATVAARFGL DCVIYMGTTD IERQQANVFR MKLLGAEVIP VVAGTGTLKD
AMNEALRDWV TNVDSTFYLI GTVAGPHPYP AMVRDFQAVI GKETRDQLQA QEGRLPDSLV
ACIGGGSNAM GLFHPFLDDK SVEIIGVEAA GYGIETGKHA ASLNGGVPGV LHGNRTFLLQ
DDDGQIIDAH SISAGLDYPG IGPEHAWLHD IGRVQYTSVT DDEALAAFHQ CCRLEGIIPA
LESAHALAEV FKRAPKLPKD HLMVVNLSGR GDKDMQTVMH HMETSKQEKH