Gene Pfl01_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0102 
Symbol 
ID3717801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp104696 
End bp105613 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content66% 
IMG OID 
ProductLysR family transcriptional regulator 
Protein accessionYP_345835 
Protein GI77456330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATG ACCTTCCCCC GCTGAACGCC CTGCGCGCCT TCGAAGCCAC CGCCCGCCTG 
AACAGCGTGA GCCAGGCTGC GGAGCAACTG CACGTCACCC ACGGCGCGGT CAGCCGCCAG
CTCAAGGTGC TGGAAGAGCA TCTCGGTGTC AGTCTTTTCG TCAAGGACGG TCGTGGCCTG
AAACTCACAG ATGCCGGCAT TCGCCTGCGC GATGCCAGCG GCGAGGCGTT CGACCGCTTG
CGCAGCGTTT GCGCCGAACT GACCCAAAGC ACCGCCGACG CGCCGTTCGT GCTCGGTTGC
TCCGGCAGCC TGCTGGCGCG CTGGTTCATT CCGCGACTGG GACGCTTGAA TGCCGATCTG
CCGGACTTGC GTCTGCACCT GTCAGCCGGC GAAGGCGATC TCGATCCACG ACGCCCGGGG
CTGGATGCAT TGCTGCTGTT CGCCGAGCCG CCATGGCCGG CAGACATGCA AGTCTATGAG
CTGGCCAGCG AGCGGATCGG CCCGGTCATG AGCCCGCTGT TCAGCGGCTA CCAGCGCCTG
CAATCAGCAC CGCCCATCGC CCTGCTCGAC GAACCCTTGC TGCACACGAC TTCACGCCCG
CAAGCCTGGC CGAGCTGGGC GCAGCAGAGC GGCCTCGACG CCAAGGCGTT GAAACTGGGG
CAAGGTTTCG AACACTTGTA TTACTTGCTG GAAGCGGCCG TCGCCGGCTT GGGCGTGGCA
ATCGCGCCAG AACCGCTGGT GACCGAAGAC TTGAAGGCCG GACGCCTGGT TGCGCCGTGG
GGTTTCAGTG AAACCTCGGC GCAACTGGCG TTGTGGCTAC CCAAGCGCGC CGCAGACGGA
CGCGCCCGGC AATTGGCGCA GTGGCTCAGA AACGAGCTGC GCCAGGCGGA TCACTCGCCG
CGCTTGAACA GCAGATAA
 
Protein sequence
MSHDLPPLNA LRAFEATARL NSVSQAAEQL HVTHGAVSRQ LKVLEEHLGV SLFVKDGRGL 
KLTDAGIRLR DASGEAFDRL RSVCAELTQS TADAPFVLGC SGSLLARWFI PRLGRLNADL
PDLRLHLSAG EGDLDPRRPG LDALLLFAEP PWPADMQVYE LASERIGPVM SPLFSGYQRL
QSAPPIALLD EPLLHTTSRP QAWPSWAQQS GLDAKALKLG QGFEHLYYLL EAAVAGLGVA
IAPEPLVTED LKAGRLVAPW GFSETSAQLA LWLPKRAADG RARQLAQWLR NELRQADHSP
RLNSR