Gene Pfl01_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0093 
Symbol 
ID3717792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp99549 
End bp100679 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345826 
Protein GI77456321 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGA TAGTCTTGGG CAGACTTTCC GGGGGATTTC TTATTTTGAT CAGGCCGCTT 
CCAAGCCATG GGTTACTTGA TCGCGTTTTG CGGGTTTTGT TTCCGGGTGT GATGATTTTG
TTGCTCAACG GTTGCTCAAG CCTGAGCTAT TACGGCCAGC TGGCCAGCGG TCAGCTGCAG
CTTTTGCGGG CGCGGGAGCC GGTGGCCAAG GTGATCGCAG ACCCGGCTCG CGATGCCAAG
CTGCGCACTC ACCTGGCCCA ATCCCAGAAA GCCCGGGCCT TCGCCAGCGA ACACCTGCAC
CTGCCGGACA ACCAAAGCTA TCGCCTTTAC GCCGATATCG GTCGGCCGTT TGTCGTGTGG
AATGTGTTCG CCACCCCGGA GTTTTCCCTG AGCCCGCAGA ACCATTGCTT CCCGATTGCC
GGTTGCGTGG CCTACCGCGG CTATTACAGC CAGAGCGCGG CGCGGGGCGA AGCTGCGATT
CAGCGCCTGC AAGGCATGGA CGTGTCGATC GGCGGCGTCG AGGCCTACTC GACCCTCGGC
TGGTTCAACG ACCCGATCCT CAATTCGATG ATGGGCTGGG GCGACGAGCG TCTGGCGACG
CTGATCTTCC ATGAACTGGC CCACCAGCGT TTCTATGTGA AGGACGACAC CGAGTTCAAC
GAGTCCTTCG CGACCTTCGT CGAGCAGGAA GGTACGCGGC AGTGGCGAGC GTTTCGCGGC
TTGCCCCCGG AAAACGACTC GAAGCTCAAG CAGCGCGATC AATTCATTCA GTTGATCCTC
GATACCCGTT CACGCCTTGA AAAACTCTAT GCACAACCAT TGGCGACAGC GCAGATGCGC
GAACGCAAGG CGGCGGAGTT CGAACGGTTT CGACACGACT ACCGAATGAT GCGCGATGGC
CAGTGGGCCG GAGACAAACG TTATGACGCC TGGGTCAATG CGCCGTTGAA CAACGCACGG
CTGTTGCCGT TCGGGCTATA TGACCAATGG GTACCGGCGT TTGCGGCGTT GTTCGGGCAA
GTGAAGGGAG ATTGGCCGCA GTTTTATGCG CGGGTCGAAC AGCTGGGTAA ATTGCCGGCG
GACAAGCGCA AGGCAGCACT GCGTGAGCTG GCTGCCCTTC GCCCGGATTG A
 
Protein sequence
MGGIVLGRLS GGFLILIRPL PSHGLLDRVL RVLFPGVMIL LLNGCSSLSY YGQLASGQLQ 
LLRAREPVAK VIADPARDAK LRTHLAQSQK ARAFASEHLH LPDNQSYRLY ADIGRPFVVW
NVFATPEFSL SPQNHCFPIA GCVAYRGYYS QSAARGEAAI QRLQGMDVSI GGVEAYSTLG
WFNDPILNSM MGWGDERLAT LIFHELAHQR FYVKDDTEFN ESFATFVEQE GTRQWRAFRG
LPPENDSKLK QRDQFIQLIL DTRSRLEKLY AQPLATAQMR ERKAAEFERF RHDYRMMRDG
QWAGDKRYDA WVNAPLNNAR LLPFGLYDQW VPAFAALFGQ VKGDWPQFYA RVEQLGKLPA
DKRKAALREL AALRPD