Gene Pfl01_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0090 
Symbol 
ID3717789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp96180 
End bp98258 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content63% 
IMG OID 
Productoligopeptidase A 
Protein accessionYP_345823 
Protein GI77456318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCTTC CAGCCAAGGT GCCAACCGTG AGCGTGAACA ACCCTCTTCT GCAGTCCTAC 
GACCTGCCGC CGTTCTCCGC GATCCGTGCC GAACACGTGC AGCCGGCCAT CGAAACCATC
CTGGCCGACA ACCGCGCCGC CATCGCCGAA ATCCTCAAGA CCCAAGGCCA GAACCCGACC
TGGGCCGGGC TGGTGCTGGC GATGGACGAA CTCAATGATC GCCTGGGCGC TGCCTGGAGT
CCGGTCAGCC ACCTCAATGC CGTGTGCAAC AGCGCCGAAC TGCGTGAAGC CTACGAGTCG
TGCCTGCCGG CATTGAGCGC CTACTCCACC GAAATGGGCC AGAACCGCGA ACTGTTCCAG
GCCTATGAAG CCCTGGCCAA CAGCCCGGCA GCCGCCGGTT TCGACGTGGC GCAAAAAACC
ATTCTGGAAC ACGCCCTGCG CGATTTCCGC CTGTCGGGTA TCGACCTGCC GGAAGCCGAA
CAGAAACGCT ACGCCGAAGT GCAGAGCAAG CTATCGGAGC TGGGCAGCCG CTTTTCCAAC
CAGTTGCTCG ACGCCACTCA GGCCTGGACC AAGCACCTGA CCGATGAAGC CGCCCTCGCC
GGCCTGACCG ATTCGGCCAA GGCGCAAATG GCTGCTGCGG CACAGGCCAA GGGCCTCGAC
GGCTGGCTGA TCACCCTGGA ATTCCCGAGC TACTACGCGG TGATGACCTA CGCCCAGGAC
CGTGCGCTGC GTGAAGAAGT CTACGCCGCC TACTGCACCC GTGCGTCGGA TCAAGGCCCG
AACGCCGGCC AGAACGACAA TGGCCCGGTG ATGGACGAAA TCCTCGACCT GCGTCAGGAA
CTGGCAAAAC TGCTCGGTTT TTCCAGCTTC TCCGAACTGA GCTTGGCCAC CAAAATGGCC
GAGTCCAGCG ATCAGGTGCT GAGCTTCCTG CGTGATCTGG CCAAGCGCAG CAAACCGTTC
GCCGCCCAGG ATCTGCAACA GCTCAAGGCT TACGCCGCCG AGCAGGGCTG CGCCGATCTG
CAAAGCTGGG ACAGCGGTTT CTACGGTGAA AAACTCCGTG AACAGCGTTA CAGCGTCGCT
CAGGAAACCC TGCGCGCCTA CTTCCCGATC GACAAAGTGC TGGGTGGTCT GTTCGCCATC
GTTCAGCGCC TGTACGGCAT CGAAATCGCC GAACTGAAAG GCTTCGACAC CTGGCACCCG
GACGTGCGCC TGTTCGAAAT CAAGGAAAAC GGTCAGCACG TCGGCCGTTT CTTCTTCGAC
CTCTACGCCC GCGCCAACAA GCGCGGCGGT GCGTGGATGG ATGGCGCCCG CGACCGTCGC
CGCACCGTCG ACGGCGTGCT GCAAAGCCCG GTGGCCAACC TTGTGTGCAA CTTCACCCCG
GCCGACAGCG GCAAACCTGC GCTGCTGACC CACGATGAAG TGACCACCCT GTTCCACGAA
TTCGGCCACG GCCTGCATCA CCTGCTGACC CGCGTCGAGC ATGCCGGCGT TTCCGGTATC
AACGGCGTGG CGTGGGACGC CGTCGAGTTG CCGAGCCAGT TCATGGAAAA CTGGTGCTGG
GAGCCGGAAG GTCTGGCGCT GATTTCCGGC CACTACGAGA CCGGCGAGCC GCTGCCGCAG
GATCTGCTGG AAAAAATGCT CGCGGCGAAG AACTTCCAGT CCGGCCTGAT GATGGTGCGC
CAACTGGAAT TCTCGCTGTT CGACTTCGAA CTGCACGCCA CCCACGGTGA CGGCCGCAGC
GTCGCGCAAG TGCTGGAAGG CGTACGCAAC GAAGTCTCGG TAATGCGACC TCCGGCCTAC
AACCGCTTCC CGAACAGCTT CGCGCACATC TTCGCCGGCG GTTACGCGGC GGGTTACTAC
AGCTACAAAT GGGCGGAAGT GCTGTCGGCA GATGCCTTCT CCAAGTTCGA AGAAGACGGC
GTGCTGAATG CCGACACCGG TCGCGCCTTC CGCGAAGCAA TCCTCGCCCG CGGCGGCTCG
CAGGAGCCGA TGGTGCTGTT CGTCGACTTC CGTGGCCGTG AGCCATCGAT TGACGCACTC
TTGCGCCACA GCGGCCTGAG TGAGGACGCG GCAGCATGA
 
Protein sequence
MFLPAKVPTV SVNNPLLQSY DLPPFSAIRA EHVQPAIETI LADNRAAIAE ILKTQGQNPT 
WAGLVLAMDE LNDRLGAAWS PVSHLNAVCN SAELREAYES CLPALSAYST EMGQNRELFQ
AYEALANSPA AAGFDVAQKT ILEHALRDFR LSGIDLPEAE QKRYAEVQSK LSELGSRFSN
QLLDATQAWT KHLTDEAALA GLTDSAKAQM AAAAQAKGLD GWLITLEFPS YYAVMTYAQD
RALREEVYAA YCTRASDQGP NAGQNDNGPV MDEILDLRQE LAKLLGFSSF SELSLATKMA
ESSDQVLSFL RDLAKRSKPF AAQDLQQLKA YAAEQGCADL QSWDSGFYGE KLREQRYSVA
QETLRAYFPI DKVLGGLFAI VQRLYGIEIA ELKGFDTWHP DVRLFEIKEN GQHVGRFFFD
LYARANKRGG AWMDGARDRR RTVDGVLQSP VANLVCNFTP ADSGKPALLT HDEVTTLFHE
FGHGLHHLLT RVEHAGVSGI NGVAWDAVEL PSQFMENWCW EPEGLALISG HYETGEPLPQ
DLLEKMLAAK NFQSGLMMVR QLEFSLFDFE LHATHGDGRS VAQVLEGVRN EVSVMRPPAY
NRFPNSFAHI FAGGYAAGYY SYKWAEVLSA DAFSKFEEDG VLNADTGRAF REAILARGGS
QEPMVLFVDF RGREPSIDAL LRHSGLSEDA AA