| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0088 |
|---|
| Symbol | |
|---|
| ID | 3717787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 93738 |
|---|
| End bp | 95780 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | oligopeptidase A |
|---|
| Protein accession | YP_345821 |
|---|
| Protein GI | 77456316 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA CCAATCCCCT CCTGCAACAC TGGACGCTGC CACCGTGGCC AGCGATTCAC
GCCGAGCATT TACTGCCGGC CGTCAACAGC ATCATTGCCG ATAACCGACG CATCATCGCC
CAGGTGATCG CCAGTCAGAC CGAACATCCC GGCTGGGATG ATCTGGTGCT GAGCATCGAC
GAGGCCGACG CGCGCCTCGG CGAAGTCCGC TCGATTCTCG AAACGTTGTC GATGGTCAGA
TCCGACGATC CGGTCTGGCT CGTGGAAAGC GCCAAGGCGC ATCTGGCGAT CAATCAGTAT
CGCTCTGAAA AAGCCCACAA TCGCCGGTTG TACGAGACCT ATCAGCGTTT GGCGCAGAGC
TCGATCGCCG GCAGTTTCGA TGAGGCGCGC AACATCGCAC TGTCGCGAAT TCTGCGCCGA
TTCAAGCAGT CGGGCATTGA GCTTCCCACT GAACAGCAGC AGGAGCTGGC GCGGTTGAAC
CGCGAGATCG GAGGCTTGGA ATTCGTATTT CTGGACAACC TCGAGCGCTG GGCCGAGGCG
TGGAGCAAAC GTGTTGACGA TGTGGCACTG CTTACGGGCC TGCCGCCGGC GATGAAGGAT
CGGCTGGCAC TCGCCGCACG CCAGACCGGC CATGACGGCT GGTTGATCCG CCTGGACCAG
AACACCTTCC AGCACATCCT TAAATACGCC GAGAACCGCG CCTTGCGGGA GGAATGCTAT
GTGGCCTACA TGACCCGTGC CTCCGATCGA GGGCCGCTGG CCGGCCGCTT CGACAACGCC
CCGGTACTGA AGAAGCTGCT CGCCTTGCGT CAGCAGAAAG CCCGTTTGCT CGGTCATGAA
AACGCCGCGC AACTGAGTCT TGCCAAAAAC AGCGCCGGGA CAACGGCATG GGTTAGTGGT
TTTCTACAGC GTCAGGCGGC GCAACTGGCA CCTACCCTCG CGCAGGATGC AGAACAACTG
ACAGACTTCG CGCAGCAACG CGGGATCGAC CGGGTCCAGC CGTGGGATGA AGACTTCCTC
GCCGAACAAT GGCGCCAGCA GCAGTTTCCC GGTGCGCTTG AAAACCTGCG GGATTACTTC
CCGCTCGAGG GCACCCTGCG CAGGCTCTTG CTGTTTTGCG AGCGAATGTT CGGGATCCGC
ATCGTCGAGC AATCCGGCGG TGGGCACTTG CACGACGATG TGCGCCTGCT GGAAATCAGC
GAGGATGAGC AGGTCATCGG CTACATCTAC CTCGATCCGT TTCACCGCGA TGGCGCTGCG
GATTTCCCCG GCACCTTCAC GCTGCGCAAC CGCCGGATCA ATGCCGAAGG CCGCCCGGCG
CTGCCGATTG CCCTGCTCTA CAGCAATTTC ACACCGGCCA GCGATACCCA TCCGTGCCGG
CTCGAGCTCC ACGATCTGCG GGTGCTGTTT CATGAATTCG GCCATTGCCT CCAGCACGTG
CTGACGCGCT CGCCCCATCA CAGCCTGTCC GGCATCCTTC AATTGGGCCA TGAAGCGGCG
GAGTTTTCCG GGCAATTGTT CGAGCAGTGG TGTCTGTCGC GTGAGTTTTT GCTGTGGCTG
GGTGCTCATT TTCAGACGGG CAAACGATTG AGCGCAGCAA GGGTCGACGC GGCATTGTCA
GCCAGTCAGG CCCATTCCGC CCGGCAACAG GCCTTTTTGC TGATGGGGGC GATGATCGAT
TTCGAGCTGC ACCTGACCCA CGGCGATGGG CGCTCGGTCG AGGAGACTTG CACCGATGTG
CAGCGCAGCC TGGGTCATCT GCAACTGCCG GACGATCATC GCTTCGCCAA TGGATTCGAT
TACATGGTGA CCCAGTACGA CGCCTCGGTT TACGCCTACG TCTGGTCGGG CGTGCTGGCT
CAGGAAGCGT TCAAGCGCTT CAGCCAGGAC TGGGTGTTCA ACGCGCAAAC CGGCCGTGAG
TTTCGTGCAA CGTTCTTTGC GCCGGGTGCG GGGCGTCCAT TGCTGGACGC GGTGGAAGCG
TTCATCGGCC GGCCGGTCGC CGGCCTCGTT GACGGAGAGG CCGGACGAGT TACTTCAGAT
TGA
|
|---|
| Protein sequence | MPDTNPLLQH WTLPPWPAIH AEHLLPAVNS IIADNRRIIA QVIASQTEHP GWDDLVLSID
EADARLGEVR SILETLSMVR SDDPVWLVES AKAHLAINQY RSEKAHNRRL YETYQRLAQS
SIAGSFDEAR NIALSRILRR FKQSGIELPT EQQQELARLN REIGGLEFVF LDNLERWAEA
WSKRVDDVAL LTGLPPAMKD RLALAARQTG HDGWLIRLDQ NTFQHILKYA ENRALREECY
VAYMTRASDR GPLAGRFDNA PVLKKLLALR QQKARLLGHE NAAQLSLAKN SAGTTAWVSG
FLQRQAAQLA PTLAQDAEQL TDFAQQRGID RVQPWDEDFL AEQWRQQQFP GALENLRDYF
PLEGTLRRLL LFCERMFGIR IVEQSGGGHL HDDVRLLEIS EDEQVIGYIY LDPFHRDGAA
DFPGTFTLRN RRINAEGRPA LPIALLYSNF TPASDTHPCR LELHDLRVLF HEFGHCLQHV
LTRSPHHSLS GILQLGHEAA EFSGQLFEQW CLSREFLLWL GAHFQTGKRL SAARVDAALS
ASQAHSARQQ AFLLMGAMID FELHLTHGDG RSVEETCTDV QRSLGHLQLP DDHRFANGFD
YMVTQYDASV YAYVWSGVLA QEAFKRFSQD WVFNAQTGRE FRATFFAPGA GRPLLDAVEA
FIGRPVAGLV DGEAGRVTSD
|
|---|
| |