Gene Pfl01_0083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0083 
Symbol 
ID3717782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp87830 
End bp88888 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content63% 
IMG OID 
Productradical SAM family protein 
Protein accessionYP_345816 
Protein GI77456311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC CTCTTCCTCC GCGCGGTCGC GGCACCGCCA CCAACCCGCA CAACCGCTTC 
GCGCCGAGTC GCTCGGTGGC CGAGGATGAC GGCTGGTTTC AGGAAGTGCC TTTGACCCAA
GGCACCGAAG TCAGCTTTGA GACGGCAAAG ACCATCATCA CCCGCAACAC CTCGCCGGAT
CTGCCCTTCG ACCGCTCGAT CAATCCCTAT CGCGGCTGCG AGCATGGCTG CATTTATTGC
TACGCACGTC CCAGCCACGC CTATTGGGAC ATGTCGCCGG GGCTGGATTT CGAAACCAAA
CTGATCGCCA AAACCAACGC GGCACAGCTA CTGGAAGAAC AGCTGGGGAA AAAAGGCTAT
CAATGCGCGC CGATCAACCT TGGCTCCAAT ACCGATCCCT ATCAGCCGAT CGAACGCGAA
CACCGGATCA CCCGCCAGAC CCTCGAAGTG CTGCTGCGCT ACCGGCATCC GGTGACCATC
GTCACCAAGG GCTCGCTGAT CCTGCGCGAC CTCGACCTGC TCACCGAACT GGCGCAACAA
CGGCTGGTGG CGGTGATGAT CAGCCTGACC ACCCTGGACG ACGAGCTCAA ACGCATTCTC
GAACCCCGCG CTGCAGCGCC CAAGGCCCGG TTGCGGGCGA TCCGGGTCAT GCGCGAGGCG
GGGATTCCGG TCGGTGTGCT GTGTTCGCCG ATGATTCCGA TGATCAACGA CAGCGAAATC
GAAAGCCTGC TGACCGAGGC CCACGCGGCC GGCGCCCAGA GCGCGGCCTA CATGATGCTG
CGCCTGCCGC TGGAGGTGGC GCCGCTGTTC GAGGAATGGC TCGAGGCGCA CTACCCGCAG
CGTGCGGCGC ATGTACTGAG CCTGATCCGC CAGAGCCGTG GCGGCGAGCT GTACGACAGT
CGTTTCGGTA CCCGGATGCG CGGCGAGGGG CCGTTTGCCG ACCTGCTCGC CCAGCGCTTC
GCCAAAGCAT TGAAACGTCT TGGGCTCAAT CACCGCGAAG GTTTCAACCT CGATTGCACG
GCCTTCTGTC CGCCGGGTCG CCAGATGGCG CTGATTTAG
 
Protein sequence
MSTPLPPRGR GTATNPHNRF APSRSVAEDD GWFQEVPLTQ GTEVSFETAK TIITRNTSPD 
LPFDRSINPY RGCEHGCIYC YARPSHAYWD MSPGLDFETK LIAKTNAAQL LEEQLGKKGY
QCAPINLGSN TDPYQPIERE HRITRQTLEV LLRYRHPVTI VTKGSLILRD LDLLTELAQQ
RLVAVMISLT TLDDELKRIL EPRAAAPKAR LRAIRVMREA GIPVGVLCSP MIPMINDSEI
ESLLTEAHAA GAQSAAYMML RLPLEVAPLF EEWLEAHYPQ RAAHVLSLIR QSRGGELYDS
RFGTRMRGEG PFADLLAQRF AKALKRLGLN HREGFNLDCT AFCPPGRQMA LI