Gene Pfl01_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0080 
Symbol 
ID3717779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp84561 
End bp85193 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345813 
Protein GI77456308 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCG CCGCATTGCG CGAGCAAATA CACATAGCCC GACAACACGA GATTGAAACC 
GGAAAGCTGA CCCGTCAGCT CGAAGCTCAA ATGCAACACC TGCACCCGGC GATCCAGTTG
CCGGAAACCG ACGCCAACGG CGTGCTGACG CGTTTTGTCG CCGCCTACAT CGACGAAGTG
CCAGACCTGC TGGATGCAGC CAATGAAGTC GCCAGGGAAG CGGGAATCGA ATCGCAGATC
AAACCGGTGC TGAAAATCGC CGAGCAGTAC TTCCTCCAGC CACCCGTGGG CCTGGACAGT
CTGCTGGACG AAGCCTATCT GGCGCATCGT TTTGTCGAAG AGGTCAACGA CCTTTACATC
AAGCATCTCG GCCAGCCACT GATCCCCTTG GACATGACGG TCGCCAATCT GATTGCTCAC
CAGCTGATCG GTGAGGAATT TGCCAACCAA CTCGACGAAG TGGTGCATCA CGCGGTGGAC
AGCATGCTCG ACGACGACAG CTTTGCGCTG GAGTCGGTGG AAGCCTACCG CGAGAAACTC
AGCAGCCCGG ACACCGGTGC GGCGTGGAAA CGCTGGCCGT GTATGAGTCG CCGTCTGGGC
GTGGGCCTGG AGCTGGATCA GCCTGCTGCT TGA
 
Protein sequence
MNTAALREQI HIARQHEIET GKLTRQLEAQ MQHLHPAIQL PETDANGVLT RFVAAYIDEV 
PDLLDAANEV AREAGIESQI KPVLKIAEQY FLQPPVGLDS LLDEAYLAHR FVEEVNDLYI
KHLGQPLIPL DMTVANLIAH QLIGEEFANQ LDEVVHHAVD SMLDDDSFAL ESVEAYREKL
SSPDTGAAWK RWPCMSRRLG VGLELDQPAA