| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0078 |
|---|
| Symbol | |
|---|
| ID | 3717777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 81389 |
|---|
| End bp | 82981 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | cytochrome-c oxidase |
|---|
| Protein accession | YP_345811 |
|---|
| Protein GI | 77456306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTG TCATCGATGA CCACGGTCAT GCCGACCACG ACCACGCCCA CGGCCCCGCC
AAAGGCCTGA TGCGCTGGGT GCTGACTACC AACCACAAGG ACATCGGCAC GCTGTACCTG
TGGTTCGCGT TCTGCATGTT CCTGCTCGGC GGCTCGTTCG CCATGGTGAT CCGCGCCGAG
CTGTTCCAGC CCGGATTGCA GATCGTCGAG CCTGCGTTCT TCAACCAGAT GACCACCATG
CACGGCCTGG TGATGGTGTT CGGTGCGGTG ATGCCGGCGT TCGTCGGCCT CGCCAACTGG
ATGATCCCGT TGATGGTCGG TGCGCCGGAC ATGGCCCTGC CGCGGATGAA CAACTTCAGC
TTCTGGCTGC TGCCGGCGGC GTTCCTGCTG CTGGTCTCGA CCCTGTTCAC CGCCGGTGGC
GGGCCGAACT TCGGCTGGAC GTTCTACGCG CCGCTGTCCA CCACCTATGC CCCGGAAAGC
GTGACGTTCT TCATCTTCGC CATCCACCTG ATGGGGATCA GTTCGATCAT GGGCGCGATC
AACGTGATCG CCACCATCCT CAACCTGCGC GCCCCCGGCA TGACCCTGAT GAAAATGCCG
CTGTTCGTCT GGACGTGGCT GATCACCGCG TTCCTGCTGA TCGCGGTGAT GCCGGTGCTG
GCCGGGTGCG TGACGATGAT GCTGATGGAC ATCCACTTCG GCACCAGCTT CTTCAGTGCC
GCCGGTGGCG GTGACCCGGT GCTGTTCCAG CATGTGTTCT GGTTCTTCGG CCACCCCGAG
GTGTACATCA TGATCCTGCC GGCCTTCGGT GCCGTCAGCC AGATCATCCC GACCTTCTCG
CGCAAGCCGC TGTTCGGCTA CACCTCGATG GTCTACGCCA CGGCGAGCAT CGCGTTCCTG
TCGTTCATCG TCTGGGCGCA CCACATGTTC GTGGTGGGCA TCCCGCTGGT GGGCGAGTTG
TTCTTCATGT ACGCGACGAT GCTGATCGCG GTACCGACCG GGGTGAAGGT GTTCAACTGG
GCCAGCACCA TGTGGCAAGG CTCGATGACC TTCGAGACGC CGATGCTGTT TGCCGTTGCG
TTCGTGATCC TGTTCTCGAT CGGCGGTTTC TCCGGGCTGA TGCTGGCCAT CGCGCCGGCG
GACTTCCAGT ACCAGGACAC CTACTTCGTG GTCGCGCACT TCCACTACGT GCTGGTGCCG
GGGGCGATCT TCGGGATCTT CGCGTCGGCC TATTACTGGC TGCCGAAATG GACCGGCCAC
ATGTACGACG AAACCCTGGG CAAGCTGCAC TTCTGGCTGT CCTTCGTCGG CATGAACCTG
ACCTTCTTCC CGATGCACTT CGTGGGTCTG GCGGGCATGC CCCGGCGGAT TCCGGACTAC
AACCTGCAGT TCGCCGACTT CAACATGGTG TCGTCGATCG GCGCGTTCAT GTTCGGTGCC
ACGCAGATCT TCTTCCTGTT CATCGTGATC AAGACCATCC GTGGCGGCGA ACCGGCTCCG
GCCAAACCGT GGGATGGTGC CGAAGGTCTG GAATGGAGCG TGCCGTCACC GGCGCCGTAT
CACACCTTCA CCACGCCGCC GGAAGTGAAA TGA
|
|---|
| Protein sequence | MSAVIDDHGH ADHDHAHGPA KGLMRWVLTT NHKDIGTLYL WFAFCMFLLG GSFAMVIRAE
LFQPGLQIVE PAFFNQMTTM HGLVMVFGAV MPAFVGLANW MIPLMVGAPD MALPRMNNFS
FWLLPAAFLL LVSTLFTAGG GPNFGWTFYA PLSTTYAPES VTFFIFAIHL MGISSIMGAI
NVIATILNLR APGMTLMKMP LFVWTWLITA FLLIAVMPVL AGCVTMMLMD IHFGTSFFSA
AGGGDPVLFQ HVFWFFGHPE VYIMILPAFG AVSQIIPTFS RKPLFGYTSM VYATASIAFL
SFIVWAHHMF VVGIPLVGEL FFMYATMLIA VPTGVKVFNW ASTMWQGSMT FETPMLFAVA
FVILFSIGGF SGLMLAIAPA DFQYQDTYFV VAHFHYVLVP GAIFGIFASA YYWLPKWTGH
MYDETLGKLH FWLSFVGMNL TFFPMHFVGL AGMPRRIPDY NLQFADFNMV SSIGAFMFGA
TQIFFLFIVI KTIRGGEPAP AKPWDGAEGL EWSVPSPAPY HTFTTPPEVK
|
|---|
| |