Gene Pfl01_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0055 
SymbolengB 
ID3717491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp60118 
End bp60762 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content58% 
IMG OID 
Productribosome biogenesis GTP-binding protein YsxC 
Protein accessionYP_345788 
Protein GI77456283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.656456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.831719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCA AGAATCCCAT CCTCGGCCTG TGCCAACAGT CCACGTTCAT GCTCAGTGCC 
GCCAAAGTCG ATCAGTGCCC CGACGACGAA GGCTTCGAAG TGGCGTTCGC CGGTCGTTCC
AACGCCGGTA AATCCAGTGC GCTGAACACT CTGACTCACG CCAGCCTGGC GCGCACCTCG
AAAACCCCGG GTCGCACACA GCTGTTGAAC TTCTTCAAGC TAGACGATGA ACGGCGTCTG
GTCGACCTCC CGGGCTACGG TTATGCAAAA GTACCAATCC CGCTGAAGCA ACACTGGCAG
CGTCACCTTG AGGCTTACCT CGGTGGCCGC GAGAGTTTGA AGGGGCTGAT TCTGATGATG
GACATCCGTC ATCCAATGAC CGACTTCGAC CTGCTGATGC TGGACTGGGC CGTTGCCGCC
GGCATGCCGA TGCACATTCT GCTGACCAAG GCAGACAAGC TGACCTACGG CGCAGCCAAG
AACACGCTGC TCAAGGTGCA GTCGGAAATC CGTAAGGGTT GGGGCGATCA AGTGACGATC
CAGCTGTTCT CCGCACCAAA ACGCATGGGC CTGGAAGAGG CTTACACTGT GTTGGCGGGC
TGGATGGAGT TGGCGGATAA AGGCGCTGAA TTGCCTGCTG AGTAA
 
Protein sequence
MQLKNPILGL CQQSTFMLSA AKVDQCPDDE GFEVAFAGRS NAGKSSALNT LTHASLARTS 
KTPGRTQLLN FFKLDDERRL VDLPGYGYAK VPIPLKQHWQ RHLEAYLGGR ESLKGLILMM
DIRHPMTDFD LLMLDWAVAA GMPMHILLTK ADKLTYGAAK NTLLKVQSEI RKGWGDQVTI
QLFSAPKRMG LEEAYTVLAG WMELADKGAE LPAE