Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0046 |
Symbol | |
ID | 3717482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 49441 |
End bp | 50787 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | two-component response regulator AlgB |
Protein accession | YP_345779 |
Protein GI | 77456274 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.384971 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCAG CCACTGAGCA CCAAGGCCGC ATTCTGCTGG TGGACGATGA ATCCGCCATC CTGCGAACCT TTCGTTATTG CCTCGAAGAC GAAGGTTATA CCGTCGCCAC CGCCAACAGT GCGGCTCAGG CTGACGCGCT GCTGCAACGC CAGGTGTTCG ACCTGTGCTT CCTTGATTTA CGCCTGGGTG AAGACAACGG CCTCGATGTA CTCGCGCAGA TGCGCATTCA GGCGCCGTGG ATGCGGGTGG TCATCGTTAC CGCCCATTCG GCCGTCGATA CCGCGGTAGA CGCGATTCAG GCCGGCGCTG CCGATTATCT GGTCAAACCG TGCAGCCCGG ATCAATTGCG CCTGGCGACC GCCAAGCAGC TTGAAGTGCG CCAGCTGTCG GCGCGTCTGG AAGCCCTCGA AGGCGAGATC CGCAAACCCA AGGACGGCCT CGATTCCCAC AGCCCGGCGA TGAAAGTCGT ACTGGAAACC GCGCGGCAAG TGGCGGGCAC CGACGCCAAC ATCCTGATCC TCGGCGAGTC CGGCACCGGT AAAGGTGAGC TGGCCCGGGC GATTCACGGC TGGAGCAAGC GCGAGAAGAA ATCCTGTGTG ACCATCAATT GCCCGTCACT GACCGCCGAA TTAATGGAGA GCGAGCTGTT TGGTCACAGT CGTGGCGCCT TCACCGGGGC CAGCGAAAGC ACGCTCGGTC GGGTCAATCA GGCCGATGGC GGTACGCTGT TTCTCGACGA GATCGGCGAT TTTCCGCTGA CATTGCAACC CAAGTTGCTG CGGTTCATTC AGGACAAGGA ATATGAGCGG GTAGGGGATC CGGTCACCCG CCGCGCCGAT GTGCGCATCC TCGCCGCCAC CAACCTCAAT CTTGAGGACA TGGTGCGCGA CGGCCGTTTC CGTGAAGACC TGCTCTATCG CCTGAACGTC ATCACCCTGC ATTTGCCGCC GCTGCGCGAG CGGGCCGAAG ACATCCTGAC CCTGGCCGAC CGTTTCCTCG CCCGTTTCGT GAAGGAGTAT GCGCGTCCGG CACGGGGCTT CAGCGACGAG GCTCGCGAAG CACTGCTGGG CTACCGTTGG CCCGGCAACA TCCGTGAGCT GCGCAACGTG GTCGAGCGGG CGAGCATCAT CTGCCCGCAG GAGCGCGTGG AAATCAGCCA CCTCGGCATG GCCGAGCAAC CGGCCAACAA CGCGCCACGG GTCGGCGCCG CGCTGAGCCT CGACGAGCTG GAAAAGGCTC ACATCGGCGC AGTACTGGCG ACCGCCGGGA CCCTCGATCA GGCTGCCAAG ACTCTGGGGA TCGACGCCTC GACCCTGTAT CGCAAGCGCA AGCAGTACAA CCTGTGA
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Protein sequence | MESATEHQGR ILLVDDESAI LRTFRYCLED EGYTVATANS AAQADALLQR QVFDLCFLDL RLGEDNGLDV LAQMRIQAPW MRVVIVTAHS AVDTAVDAIQ AGAADYLVKP CSPDQLRLAT AKQLEVRQLS ARLEALEGEI RKPKDGLDSH SPAMKVVLET ARQVAGTDAN ILILGESGTG KGELARAIHG WSKREKKSCV TINCPSLTAE LMESELFGHS RGAFTGASES TLGRVNQADG GTLFLDEIGD FPLTLQPKLL RFIQDKEYER VGDPVTRRAD VRILAATNLN LEDMVRDGRF REDLLYRLNV ITLHLPPLRE RAEDILTLAD RFLARFVKEY ARPARGFSDE AREALLGYRW PGNIRELRNV VERASIICPQ ERVEISHLGM AEQPANNAPR VGAALSLDEL EKAHIGAVLA TAGTLDQAAK TLGIDASTLY RKRKQYNL
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