Gene Pfl01_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0037 
Symbol 
ID3717473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp41154 
End bp42302 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345770 
Protein GI77456265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.151467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.178928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA GCCCAACGAC CGGCAGTGCC CGCCTGGACA CCTCGATCAC CCCTGCCCGC 
CTGCGGGTGA CCGGGGACTG GACGCTTGCC CATTACGCCG AGCTCAAGCA ACTGAGCGAA
ACGCTCAACG GCCAGTACGA CGCCAACACC CCGATCGATC TAAACGGCCT CGGCGCCCTC
GACACCGCCG GCGCGTCGTT GCTGGTGGAA CTGCTCGGCT CCGAGCGGCT GGGCAAGTCC
GCCGAACACC CCGACTGCAC GATTTCCAGC GCCGACCGCG CCTTGCTGCA AACCGTGTAT
CGCTCGCTGA CCGACTTCTG CGTGCCGATC AAGGAACCGG AAATCAGCGT CAGCGTGCAA
CTGCTGACGC GCATCGGCCG GGCCGTCGAT ACGGTCTGGC AGGACACCCT GCAGTTGCTC
GGCTTCGTCG GCCTGATCCT CGAAACCATC GCCCGCAGCC TGTTCCGGCC CAAGCGCTGG
CGGATCACGC CGATGATTGC GCACATCGAA CAGACCGGCC TCGACGCCGC GCCCATCGTG
GCGTTGCTGA CCTTTCTGGT GGGGGCCGTG GTGGCATTCC TCGGGGCGAC GGTGCTGGCC
AGTTTCGGCG CCAGCGTGTT CACCGTGGAT CTGGTCGGCT TCGCCTTCCT GCGCGAGTTC
GGCGTGCTGC TCACGGCGAT TCTGATGGCC GGCCGCACCG CCAGTGCCTT CACCGCGCAG
ATCGGCTCGA TGAAGGCCAA CGAGGAAATA GACGCGATTC GTACCCTCGG CCTCGACCCC
ATGGAATTGC TGGTGGTACC GCGGGTGTTG GCGCTGCTGG TGGCGCTGCC GATGCTGACG
TTTCTGGCGA TGATCTGCGG GATCGTCGGC GGCGCGGTGG TCTGCGCGGT GTCGCTGGAT
ATCTCGCCGG CGATGTTCCT GTCGCTGCTG CAAAGCGACA TAGGGATTCA ACATTTCCTG
GTGGGCCTGG TCAAAGCCCC GATCTTTGCG TTCCTGATCG CCGCCATCGG CTGTCTGGAA
GGCTTCAAGG TCAGCGGCAG CGCCGAATCG GTCGGCGCCC ACACCACCTC AAGCGTGGTG
CAATCGATTT TCGTGGTGAT CGTGCTCGAT GCGGTCGCCG CGCTGTTTTT CATGGAGATG
GGCTGGTGA
 
Protein sequence
MTSSPTTGSA RLDTSITPAR LRVTGDWTLA HYAELKQLSE TLNGQYDANT PIDLNGLGAL 
DTAGASLLVE LLGSERLGKS AEHPDCTISS ADRALLQTVY RSLTDFCVPI KEPEISVSVQ
LLTRIGRAVD TVWQDTLQLL GFVGLILETI ARSLFRPKRW RITPMIAHIE QTGLDAAPIV
ALLTFLVGAV VAFLGATVLA SFGASVFTVD LVGFAFLREF GVLLTAILMA GRTASAFTAQ
IGSMKANEEI DAIRTLGLDP MELLVVPRVL ALLVALPMLT FLAMICGIVG GAVVCAVSLD
ISPAMFLSLL QSDIGIQHFL VGLVKAPIFA FLIAAIGCLE GFKVSGSAES VGAHTTSSVV
QSIFVVIVLD AVAALFFMEM GW