Gene Pfl01_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0028 
Symbol 
ID3717647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp31102 
End bp31761 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_345761 
Protein GI77456256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.163788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.638371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATG CCGAAACCCC GGCGGTGAAA GTGGTGCTCT ATGGTGCCAT GAGTAGCCTG 
GGCAGTGCGT TGATGGCTGA ACTGCTGCGT CGCCAGCACG AAGTCATTGC CATCCTCGAC
GATCTGACGG CGCTCGCCCC ACGGCCGGGG CTGCGCACCA AAAGCGGCGA TCTGCTCGAT
GCCGAGCGGG TCAACCAGAG TGTCGCCGGC AGCTCGGCAG TGATCTGCCT GCTCAATGCG
CCGGGCTTGC CGCTGAGCAG CGATCATGTC GAGAAATCCG TGGTGTTGGG GCCTGTGGAA
CAGGTGCTGG CGGTGGATGC GCTGATCGAC GGACTGCAGG CGGCGAACGT CTCGCGGCTG
TTTGTCATCG GCGAATTCGA AGCCCTGGAC GATCCGGAAA ACGCCGACCC GTTGCAACGC
CACGCCGCTC AAGAGGTTCG CGAAGCCCTG CAAAGCAGCC CGCTGCACTG GACGCTGGTG
AATGCACCGC GCAGCGTGGC CGGGCTGACG ATCGAGCATT TCAGTCAGGT CGGCCGCACG
CTTGAACCGG GTCTGGCCGA ACCGCTGGAG CGCCTGAACC GGGTGGCGGT GGGCATTGCC
GATGAGCTGC GGCTGAATTT GCATCTGCGC CAGCACGTGG ATTTTGTCGC CGCTTCTTGA
 
Protein sequence
MKNAETPAVK VVLYGAMSSL GSALMAELLR RQHEVIAILD DLTALAPRPG LRTKSGDLLD 
AERVNQSVAG SSAVICLLNA PGLPLSSDHV EKSVVLGPVE QVLAVDALID GLQAANVSRL
FVIGEFEALD DPENADPLQR HAAQEVREAL QSSPLHWTLV NAPRSVAGLT IEHFSQVGRT
LEPGLAEPLE RLNRVAVGIA DELRLNLHLR QHVDFVAAS