Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0028 |
Symbol | |
ID | 3717647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 31102 |
End bp | 31761 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_345761 |
Protein GI | 77456256 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.163788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.638371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATG CCGAAACCCC GGCGGTGAAA GTGGTGCTCT ATGGTGCCAT GAGTAGCCTG GGCAGTGCGT TGATGGCTGA ACTGCTGCGT CGCCAGCACG AAGTCATTGC CATCCTCGAC GATCTGACGG CGCTCGCCCC ACGGCCGGGG CTGCGCACCA AAAGCGGCGA TCTGCTCGAT GCCGAGCGGG TCAACCAGAG TGTCGCCGGC AGCTCGGCAG TGATCTGCCT GCTCAATGCG CCGGGCTTGC CGCTGAGCAG CGATCATGTC GAGAAATCCG TGGTGTTGGG GCCTGTGGAA CAGGTGCTGG CGGTGGATGC GCTGATCGAC GGACTGCAGG CGGCGAACGT CTCGCGGCTG TTTGTCATCG GCGAATTCGA AGCCCTGGAC GATCCGGAAA ACGCCGACCC GTTGCAACGC CACGCCGCTC AAGAGGTTCG CGAAGCCCTG CAAAGCAGCC CGCTGCACTG GACGCTGGTG AATGCACCGC GCAGCGTGGC CGGGCTGACG ATCGAGCATT TCAGTCAGGT CGGCCGCACG CTTGAACCGG GTCTGGCCGA ACCGCTGGAG CGCCTGAACC GGGTGGCGGT GGGCATTGCC GATGAGCTGC GGCTGAATTT GCATCTGCGC CAGCACGTGG ATTTTGTCGC CGCTTCTTGA
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Protein sequence | MKNAETPAVK VVLYGAMSSL GSALMAELLR RQHEVIAILD DLTALAPRPG LRTKSGDLLD AERVNQSVAG SSAVICLLNA PGLPLSSDHV EKSVVLGPVE QVLAVDALID GLQAANVSRL FVIGEFEALD DPENADPLQR HAAQEVREAL QSSPLHWTLV NAPRSVAGLT IEHFSQVGRT LEPGLAEPLE RLNRVAVGIA DELRLNLHLR QHVDFVAAS
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