Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0026 |
Symbol | |
ID | 3717645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 28518 |
End bp | 30050 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | sulfatase |
Protein accession | YP_345759 |
Protein GI | 77456254 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.407954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATGCC GCGATCACAT GAAGCGCAAG AACATTCTTT TCATCATGGC CGATCAAATG GCCGCGCCAA TGTTGCCGTT CTACGGCCCG TCGCCGATCA AACTGCCGAA TCTCAGCCGC CTCGCCGAAC AAGGCGTGGT GTTCGATGCC GCGTACTGCA ACAGCCCGCT GTGCGCACCG TCGCGTTTTA CCTTGGTCAG CGGGCAGTTG CCGAGCAAGA TCGGCGCCTA CGACAACGCC GCCGATTTCC CCGCCGACAT TCCCACCTAC GCCCATTACC TGCGCCGCCT CGGTTACCGC ACCGCGCTCT CCGGCAAGAT GCACTTCTGC GGCCCCGATC AACTGCACGG TTACGAAGAG CGCCTGACCA GTGATATCTA CCCGGCCGAC TACGGCTGGG CGGTGAACTG GGACGAGCCC GATGTGCGGC CGAGCTGGTA TCACAACATG TCTTCGGTGT TGCAGGCCGG GCCGTGCGTG CGCACCAACC AGCTCGACTT CGATGAAGAG GTGGTGTTCA AGGCTCAGCA ATATCTGTTT GACCATATTC GCGAGGACGG CGACCAGCCG TTCTGCCTGA CCGTGTCGAT GACTCACCCG CACGATCCGT ACACGATTCC CAAGGCATTC TGGGATTTGT ACGACGATGC GGATATACCG CTTCCAACGA CGCCGGATCA GCATTCACTC GATCCGCATT CCCAGCGTTT GCTCAAGGTC TACGACCTGT GGGACAAGCC GCTGCCTGTG GATAAGATTC GCGACGCGCG CCGTGCCTAC TTCGGTGCTT GCAGTTATAT CGACGCCAAC GTCGGCAAAC TTCTGCAAAC CCTCGAAGAT TGTGGGCTGA TGGATGACAC CGTCATCGTG TTTTCCGGTG ACCATGGCGA CATGCTCGGC GAGAAGGGCC TCTGGTACAA AATGCACTGG TTCGAAATGG CCGCGCGGGT TCCCCTGTTG ATAAGTGCAC CCGGTCAGTT CAAATCGGGC CGTGTCAGCG CTGCCGTCTC CACCGCCGAC CTGTTGCCGA CCTTCGTCGA GCTGGCGGGC GGCAGCCTGG AACCGAATCT GCCGCTGGAC GGCCGCTCGT TGGTTCCGCA CCTGAACGGG CAGGGCGGTC ACGACGAAGT GTTCGGCGAA TACATGGCCG AAGGCACCGT CAGCCCGCTG ATGATGATCC GGCGTGGCGC GTACAAATTT ATCTACAGCG AAACCGACCC TTGCCTACTC TTCGATGTGG ATAACGATCC ACGCGAGCAG GAAGAACTCA GCCAATCGCC ACAACATCGC CAACTGTTCG ACGATTTTCT CGCCGAAGCG CGGGCCAAGT GGGACATCCC GGCCATCCAC CGCAAAGTCC TAGAAAGCCA GCGCCGTCGG CGTTTCGTCG CCGAGGCGCT GACGATCGGC AAACTGAAGA GCTGGGATCA CCAGCCGCTG GTGGACGCCA GTCAGCAATA CATGCGCAAC CACATCGACC TCGATGACCT GGAGCGCAAG GCCCGTTATC CACAACCCTG CCAAAACCAA TAA
|
Protein sequence | MECRDHMKRK NILFIMADQM AAPMLPFYGP SPIKLPNLSR LAEQGVVFDA AYCNSPLCAP SRFTLVSGQL PSKIGAYDNA ADFPADIPTY AHYLRRLGYR TALSGKMHFC GPDQLHGYEE RLTSDIYPAD YGWAVNWDEP DVRPSWYHNM SSVLQAGPCV RTNQLDFDEE VVFKAQQYLF DHIREDGDQP FCLTVSMTHP HDPYTIPKAF WDLYDDADIP LPTTPDQHSL DPHSQRLLKV YDLWDKPLPV DKIRDARRAY FGACSYIDAN VGKLLQTLED CGLMDDTVIV FSGDHGDMLG EKGLWYKMHW FEMAARVPLL ISAPGQFKSG RVSAAVSTAD LLPTFVELAG GSLEPNLPLD GRSLVPHLNG QGGHDEVFGE YMAEGTVSPL MMIRRGAYKF IYSETDPCLL FDVDNDPREQ EELSQSPQHR QLFDDFLAEA RAKWDIPAIH RKVLESQRRR RFVAEALTIG KLKSWDHQPL VDASQQYMRN HIDLDDLERK ARYPQPCQNQ
|
| |