Gene Pfl01_0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0021 
Symbol 
ID3717640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp23036 
End bp24013 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content64% 
IMG OID 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_345754 
Protein GI77456249 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00189953 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGC GAATCCAGTT CCGCGCCCAC GGCGGCCCCG AAGTGCTCGA GTACGTTGAC 
TATCAACCGG CCGAGCCCGG TCCGCAGCAG GTTCGCGTGA GCAACAAGGC CATCGGCCTG
AACTTCATCG ACACCTACTA CCGCAGCGGT CTTTACGCGC CACCGGCCTT GCCGTCGGGC
GTGGGTGCGG AAGGCGCCGG CATTGTCGAG GCGGTGGGCA GCGAAGTCAC CCGGTTCAAG
GTCGGCGACC GCGTGGCTTA TGGCAGCGGC CCGCTGGGTG CATACAGCGA CGTCCACGTC
CTGCCGGAAG CGAATCTGGT GCACCTGCCG GACGCCATCA GCTTCGAAAC CGCCGCCGGC
GTGATGCTCA AGGGCCTGAC CGTGCAGTAC CTGCTGCGCC AGACCTACGA ACTCAAGGGT
GGCGAAACCA TTCTGTTCCA CGCAGCGGCC GGCGGCGTCG GCTTGCTTGC CTGCCAATGG
GCCAAAGCCC TGGGCGTGAA GCTGATCGGC ACCGTCAGCT CGAAAGCCAA AGCCGATCTC
GCCAAGGCCC ACGGCGCCTG GGAAACCATC GACTACAGCC ACGAAAACGT CGCCCAACGG
GTGCTGGAAT TGACCGACGG GAAAAAAGTC CCGGTGGTCT ACGACGGCGT CGGCAAGGAC
ACCTGGCCGG CTTCGCTGGA CAGCGTGGCG CCCCGTGGTC TGTTGGTGAG CTTCGGCAAC
GCCTCGGGTG CGGTGGACGG GGTGAACCTC GGTATTCTCG CGGCAAAAGG TTCGCTGTAC
GTCACCCGGC CGACCCTGGC GACCTACGCC AATAACGCTG AAAACCTTCA GCGCATGGCG
GATGAGCTGT TCGGGATGAT CACCAGCGGC AAGCTGAAAG TGGATATCAG CCAGCGTTAT
CCACTGGCTG ATGCGGCGAA AGCGCAGACC GAGCTGTCGG CGCGGCGCAC GACAGGTTCG
ACTGTTTTAC TGCCTTAA
 
Protein sequence
MAKRIQFRAH GGPEVLEYVD YQPAEPGPQQ VRVSNKAIGL NFIDTYYRSG LYAPPALPSG 
VGAEGAGIVE AVGSEVTRFK VGDRVAYGSG PLGAYSDVHV LPEANLVHLP DAISFETAAG
VMLKGLTVQY LLRQTYELKG GETILFHAAA GGVGLLACQW AKALGVKLIG TVSSKAKADL
AKAHGAWETI DYSHENVAQR VLELTDGKKV PVVYDGVGKD TWPASLDSVA PRGLLVSFGN
ASGAVDGVNL GILAAKGSLY VTRPTLATYA NNAENLQRMA DELFGMITSG KLKVDISQRY
PLADAAKAQT ELSARRTTGS TVLLP