Gene Pfl01_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_0019 
Symbol 
ID3717638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp21282 
End bp22382 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content65% 
IMG OID 
ProductSMF protein 
Protein accessionYP_345752 
Protein GI77456247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000611984 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGC CTGTCTCTGC GTCGGTTTCC CCGGCGGAAC TGGAAGCGCG CCTGCGCCTG 
CACCGCTTGC CGGAAGTCGG TCCCAAACGT TTTGCCAAGC TGCTCGAAGC CTTCGGCTCT
GCCTCCAAGG CAATCAGCGC GCCGGCCAGC GCCTGGCGCT CGCTGGGTTT GCCGGCGGCT
TGTGCCGAGG CCCGGCGCTG TCCTGAAGTT CGCGACGGCG CCAGCCACGC ATTGCGCTGG
CTAGAGCGTC CGGATCAACA TTTGCTGATG TGGGATCACC CGGATTATCC GGCCCTGCTG
GCGCAGATTC CCGATCCACC GCCCCTGCTG TTTGTCGCTG GCGACCCACG GATTCTGGAA
AAACCGCAAC TGGCGGTGAT CGGCAGTCGC CGCGCTTCCC GCCCGGGCAT GGACACTGCC
GCTGCGTTTT CCCGCAGTCT GGCCGGGGCC GGATTTGTCA TCACCAGTGG GCTGGCGCTG
GGCATCGATG CGGCGGCGCA TCAAGCTGCT GTCGACGTCG GCGGGCAAAC GGTCGGCGTG
CTCGGTACCG GTCTGGAAAA CTTTTATCCA CAGCGCAATC GGCGGTTGGC GGACGTGATG
ATTGCGTCCG GCAGTGCGGT GGTTTCGGAA TTTCCTCTGG ACACCGGGCC GACGGCCAGC
AACTTCCCAA GACGCAATCG GATCATCAGC GGTTTGTCCC TCGGCGTGCT GGTGGTCGAG
GCCAGCGTGG CCAGCGGTTC GTTGATCACC GCGCGGCTGG CGGCGGAACA GGGTCGCGAG
GTGTACGCCA TTCCGGGTTC GATCCACCAC CCCGGCGCCC GGGGCTGTCA TCAACTGATC
CGTGACGGCG CCGTGCTGGT GGAAACCATC GAGCACATTC TCGAAGCCCT GCGCGGCTGG
CAACATCTGC CGGTATCCAC AGCCGCAGCG AATCCGGACA ACCCGTTGTT GCGTCTATTG
CACGCCGCGC CGCACACCAG CGAAGGGCTG GCCGACAGCA GTGGCTGGGC GTTACCCAAA
GTCCTGGCGG CATTGACCGA ACTGGAGATG GATGGCCGCG CGGTGTGCGA AAACGGCCGC
TGGTTTGCGC GCGTGAGCTA G
 
Protein sequence
MMMPVSASVS PAELEARLRL HRLPEVGPKR FAKLLEAFGS ASKAISAPAS AWRSLGLPAA 
CAEARRCPEV RDGASHALRW LERPDQHLLM WDHPDYPALL AQIPDPPPLL FVAGDPRILE
KPQLAVIGSR RASRPGMDTA AAFSRSLAGA GFVITSGLAL GIDAAAHQAA VDVGGQTVGV
LGTGLENFYP QRNRRLADVM IASGSAVVSE FPLDTGPTAS NFPRRNRIIS GLSLGVLVVE
ASVASGSLIT ARLAAEQGRE VYAIPGSIHH PGARGCHQLI RDGAVLVETI EHILEALRGW
QHLPVSTAAA NPDNPLLRLL HAAPHTSEGL ADSSGWALPK VLAALTELEM DGRAVCENGR
WFARVS