Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_0019 |
Symbol | |
ID | 3717638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 21282 |
End bp | 22382 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | SMF protein |
Protein accession | YP_345752 |
Protein GI | 77456247 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000611984 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGATGC CTGTCTCTGC GTCGGTTTCC CCGGCGGAAC TGGAAGCGCG CCTGCGCCTG CACCGCTTGC CGGAAGTCGG TCCCAAACGT TTTGCCAAGC TGCTCGAAGC CTTCGGCTCT GCCTCCAAGG CAATCAGCGC GCCGGCCAGC GCCTGGCGCT CGCTGGGTTT GCCGGCGGCT TGTGCCGAGG CCCGGCGCTG TCCTGAAGTT CGCGACGGCG CCAGCCACGC ATTGCGCTGG CTAGAGCGTC CGGATCAACA TTTGCTGATG TGGGATCACC CGGATTATCC GGCCCTGCTG GCGCAGATTC CCGATCCACC GCCCCTGCTG TTTGTCGCTG GCGACCCACG GATTCTGGAA AAACCGCAAC TGGCGGTGAT CGGCAGTCGC CGCGCTTCCC GCCCGGGCAT GGACACTGCC GCTGCGTTTT CCCGCAGTCT GGCCGGGGCC GGATTTGTCA TCACCAGTGG GCTGGCGCTG GGCATCGATG CGGCGGCGCA TCAAGCTGCT GTCGACGTCG GCGGGCAAAC GGTCGGCGTG CTCGGTACCG GTCTGGAAAA CTTTTATCCA CAGCGCAATC GGCGGTTGGC GGACGTGATG ATTGCGTCCG GCAGTGCGGT GGTTTCGGAA TTTCCTCTGG ACACCGGGCC GACGGCCAGC AACTTCCCAA GACGCAATCG GATCATCAGC GGTTTGTCCC TCGGCGTGCT GGTGGTCGAG GCCAGCGTGG CCAGCGGTTC GTTGATCACC GCGCGGCTGG CGGCGGAACA GGGTCGCGAG GTGTACGCCA TTCCGGGTTC GATCCACCAC CCCGGCGCCC GGGGCTGTCA TCAACTGATC CGTGACGGCG CCGTGCTGGT GGAAACCATC GAGCACATTC TCGAAGCCCT GCGCGGCTGG CAACATCTGC CGGTATCCAC AGCCGCAGCG AATCCGGACA ACCCGTTGTT GCGTCTATTG CACGCCGCGC CGCACACCAG CGAAGGGCTG GCCGACAGCA GTGGCTGGGC GTTACCCAAA GTCCTGGCGG CATTGACCGA ACTGGAGATG GATGGCCGCG CGGTGTGCGA AAACGGCCGC TGGTTTGCGC GCGTGAGCTA G
|
Protein sequence | MMMPVSASVS PAELEARLRL HRLPEVGPKR FAKLLEAFGS ASKAISAPAS AWRSLGLPAA CAEARRCPEV RDGASHALRW LERPDQHLLM WDHPDYPALL AQIPDPPPLL FVAGDPRILE KPQLAVIGSR RASRPGMDTA AAFSRSLAGA GFVITSGLAL GIDAAAHQAA VDVGGQTVGV LGTGLENFYP QRNRRLADVM IASGSAVVSE FPLDTGPTAS NFPRRNRIIS GLSLGVLVVE ASVASGSLIT ARLAAEQGRE VYAIPGSIHH PGARGCHQLI RDGAVLVETI EHILEALRGW QHLPVSTAAA NPDNPLLRLL HAAPHTSEGL ADSSGWALPK VLAALTELEM DGRAVCENGR WFARVS
|
| |